Query= MSMg01no402_k09.b1 MSMg01no402_k09.b1 CHROMAT_FILE:
MSMg01no402_k09.b1 PHD_FILE: MSMg01no402_k09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:37 2005
(391 letters)
>mm_chr7_81373525_81374315
Length = 791
Score = 603 bits (312), Expect = e-177
Identities = 336/344 (97%), Gaps = 1/344 (0%)
Strand = Plus / Plus
Query: 49 agagaaagagagaaagagagagagagagagagagagagagagattaaggaagacaacctc 108
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 agagagagagagagagagagagagagagagagagagagagagattaaggaagacaacctc 308
Query: 109 tggcttccacatgtataggcatatgtgcacatgtaaacccctacaacatgtaccctgaca 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tggcttccacatgtataggcatatgtgcacatgtaaacccctacaacatgtaccctgaca 368
Query: 169 tacaatcatgtatatacatttcacatatatatacatacaaaatcatttgatagcatattc 228
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tacaaacatgtatatacatttcacatatatatacatacaaaatcatttgatagcatattc 428
Query: 229 aagatctttatgttctctattctgttccatagatctacgagcctgttcggtagaaccaga 288
|||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 429 aagatctttatgaactctattctgttccatagatctatgagcctgttcggtagaaccaga 488
Query: 289 cttatttgattattataattttgcagtacatattttgaaattaaatatgggatctctttt 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cttatttgattattataattttgcagtacatattttgaaattaaatatgggatctctttt 548
Query: 349 tcttgttttacatcagttctcatttttt-ctgtttgaagtcttg 391
||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 549 tcttgtttttcatcagttctcatttttttctgtttgaagtcttg 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no402_k09.g1 MSMg01no402_k09.g1 CHROMAT_FILE:
MSMg01no402_k09.g1 PHD_FILE: MSMg01no402_k09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:37 2005
(425 letters)
>mm_chr7_81545323_81546147
Length = 825
Score = 799 bits (413), Expect = 0.0
Identities = 422/425 (99%)
Strand = Plus / Minus
Query: 1 ctgaccacgaggtttagcttcaaattaagtgagtggctgattgcaccttctagagaagag 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 625 ctgaccacgaggtttagcttcaaattaagtgagtggctgaatgcaccttctagagaagag 566
Query: 61 tggataggagcaggtaagaggtctggttcccagagtaaccccatgcagttctgaattcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tggataggagcaggtaagaggtctggttcccagagtaaccccatgcagttctgaattcca 506
Query: 121 ttgctttcttctgtctgccacaacgttcaatagaagatgctgtgtcccactccccactcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgctttcttctgtctgccacaacgttcaatagaagatgctgtgtcccactccccactcc 446
Query: 181 taccctgatcttcccagccaaggcaaacacttcaattctttttactgctagcatttagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taccctgatcttcccagccaaggcaaacacttcaattctttttactgctagcatttagca 386
Query: 241 tatatcagtcattaaatatgtctggcaaaggatatgccgagtctctgcagaacctgaaat 300
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 385 tatatcagtcattaaatatgtctggcaaagggtatgctgagtctctgcagaacctgaaat 326
Query: 301 gggttttaaaaggatagaatgttgactgttgccaacaaatatggaagttgacctcaggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gggttttaaaaggatagaatgttgactgttgccaacaaatatggaagttgacctcaggga 266
Query: 361 ttcactaaaacctagtactggttatttatgtcttctaaaagatgactgatttggggagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcactaaaacctagtactggttatttatgtcttctaaaagatgactgatttggggagca 206
Query: 421 tttag 425
|||||
Sbjct: 205 tttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
