Query= MSMg01no404_b07.b1 MSMg01no404_b07.b1 CHROMAT_FILE:
MSMg01no404_b07.b1 PHD_FILE: MSMg01no404_b07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:37 2005
(519 letters)
>mm_chr7_111878882_111879800
Length = 919
Score = 607 bits (314), Expect = e-178
Identities = 325/330 (98%), Gaps = 4/330 (1%)
Strand = Plus / Minus
Query: 4 ggaattcattggtctttc--ctctggaaacactgtctttttaaagaaaatggtattgtct 61
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ggaattcattggtc--acagctctggaaacactgtctttttaaagaaaatggtattgtct 271
Query: 62 ttgtgatcaaagatatagcatataagactttaggtcatttggtattgcctttttatgtat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ttgtgatcaaagatatagcatataagactttaggtcatttggtattgcctttttatgtat 211
Query: 122 gtgatataaagtgtggatactttgatccttcttagaaggggaaacaaaatacccatggaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gtgatataaagtgtggatactttgatccttcttagaaggggaaacaaaatacccatggaa 151
Query: 182 ggagttacagagacagctttcagagcaaagactgaaggaataaccatccagagactgccc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ggagttacagagacagctttcagagcaaagactgaaggaataaccatccagagactgccc 91
Query: 242 cacctgggaatccattccataaacaaccaccaaacccagacactattgcagatgccaaca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 cacctgggaatccattccataaacaaccaccaaacccagacactattgcagatgccaaca 31
Query: 302 agagcttgctcacaggagtctgatatagtt 331
||||||||||||||||||||||||||||||
Sbjct: 30 agagcttgctcacaggagtctgatatagtt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no404_b07.g1 MSMg01no404_b07.g1 CHROMAT_FILE:
MSMg01no404_b07.g1 PHD_FILE: MSMg01no404_b07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:37 2005
(462 letters)
>mm_chr7_111705701_111706562
Length = 862
Score = 886 bits (458), Expect = 0.0
Identities = 461/462 (99%)
Strand = Plus / Plus
Query: 1 tctgtgattccattctctggtattcgtactgctctaaattctgtgccctggatcactgta 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgtgattccattctctggtattcatactgctctaaattctgtgccctggatcactgta 260
Query: 61 cttttaaggcattcttgtggccccttagatttcacatttaggacttcagtgaaatgatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttttaaggcattcttgtggccccttagatttcacatttaggacttcagtgaaatgatta 320
Query: 121 tgagtgtattgagttttaagattctatacagtcattgagaacaggtaagacaagcctact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagtgtattgagttttaagattctatacagtcattgagaacaggtaagacaagcctact 380
Query: 181 tctttatactactcacctcatcacttccaatattcctggtattcagtgaacagtgagtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctttatactactcacctcatcacttccaatattcctggtattcagtgaacagtgagtac 440
Query: 241 gtgtttgccttatcaaatgcttcaaaatgactattagttaatgagaaaaacctgtatttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtttgccttatcaaatgcttcaaaatgactattagttaatgagaaaaacctgtatttt 500
Query: 301 tcaggaaaattgtttgcttggactcattagtcagtctacagagtcagaaaacttgggaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaggaaaattgtttgcttggactcattagtcagtctacagagtcagaaaacttgggaga 560
Query: 361 ctcataataaaatattttccacccagatattggtgataattgttatcacacataatactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcataataaaatattttccacccagatattggtgataattgttatcacacataatactt 620
Query: 421 ggaatttctctctatgtttaatatttgtttatttattttgtg 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggaatttctctctatgtttaatatttgtttatttattttgtg 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
