Query= MSMg01no404_e13.b1 MSMg01no404_e13.b1 CHROMAT_FILE:
MSMg01no404_e13.b1 PHD_FILE: MSMg01no404_e13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:54 2005
(428 letters)
>mm_chr7_135289747_135290575
Length = 829
Score = 683 bits (353), Expect = 0.0
Identities = 411/435 (94%), Gaps = 9/435 (2%)
Strand = Plus / Minus
Query: 1 tggaagcactcagcagaggtctcaatctgccctgtctatgacatttgcccagccttcacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 500 tggaagcactcagcagaggtctcaatctgccctgtctatgacatttgcccagctttcacc 441
Query: 61 cattggcaacattcttaagtttcattttccctctgctcaaagaactcctcccaaatgttc 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 caatggcaacattcttaagtttcattttccctctgctcaaagaactcctcccaaatgttc 381
Query: 121 ccagctgccctggggacctctctaagtatgactgacctgtagg-ccacataggtctacaa 179
|||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 380 ccagctaccctggggacctctctaagtatgactgacctgtgggatcacataggtctacaa 321
Query: 180 gtggcatgtcctatctgtggctccttgcagagtgccacgacattacctttgtatacacac 239
|||| |||||||||||| |||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 320 gtggtatgtcctatctgcggctccctgcagagtgccacgacattacctttatatacacac 261
Query: 240 atagagcatgtttttttctacctggagaaccccaaagatgcagagcaataaaaga----- 294
|||||||||| | ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 260 atagagcatgcatctttctacctggagaaccccaaagatgcagagcaatgaaagaatgaa 201
Query: 295 ---atgaagaggccctcacattaggcggtcccataacagcgtggattaattacacacagg 351
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 200 agcatgaagaggccctcacattaggtggtcccataacagcgtggattaattacacacagg 141
Query: 352 agctcaacagatgtttgtttctgtcaaatgaattcatagaaagtagctgtgcactatgtc 411
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 agctcaacagatgcttgtttctgtcaaatgaattcatagaaagtagctgtgcactatgtc 81
Query: 412 tgacatgaagcaaac 426
|||||||||||||||
Sbjct: 80 tgacatgaagcaaac 66
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 829
Length adjustment: 9
Effective length of query: 419
Effective length of database: 820
Effective search space: 343580
Effective search space used: 343580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no404_e13.g1 MSMg01no404_e13.g1 CHROMAT_FILE:
MSMg01no404_e13.g1 PHD_FILE: MSMg01no404_e13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:54 2005
(311 letters)
>mm_chr7_135113438_135114148
Length = 711
Score = 551 bits (285), Expect = e-161
Identities = 301/309 (97%), Gaps = 6/309 (1%)
Strand = Plus / Plus
Query: 1 ttgaagttggctgacaatctgtgattcacagaggtggtgccatttttacctcacaagggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgaagttggctgacaatctgtgattcacagaggtggtgccatttttacctcacaagggc 260
Query: 61 aaaacatttttctttccatatcagcacatttaaaatgtagttagggccaggagtggtggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaacatttttctttccatatcagcacatttaaaatgtagttagggccaggagtggtggc 320
Query: 121 acatacaactttatccagcactctgggaggcagaggctagtagatctcttgaatcttgag 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacacaactttatccagcactctgggaggcagaggctagtagatctcttgaatcttgag 380
Query: 181 ttggagaccagcctggtctacaaggtgagttccaggacagccaagggctacacagaaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggagaccagcctggtctacaaggtgagttccaggacagccaagggctacacagaaatc 440
Query: 241 ctgtctttttt--aaaaaacaaaaacagattaaaatgcagtttgcaggaatcttttgtgt 298
||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 ctgtctt----gaaaaaaacaaaaacagattaaaatgcagtttgtaggaatcttttgtgt 496
Query: 299 tatgattag 307
|||||||||
Sbjct: 497 tatgattag 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
