BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-404F07.T7 (MSMg01no404_f07.b1) | MSMg01-404F07.TJ (MSMg01no404_f07.g1) |
ACC | AG503025 | AG503026 |
length | 830 | 795 |
length of high quality (start - end) | 224 (70 - 293) | 119 (68 - 186) |
definition | CHROMAT_FILE: MSMg01no404_f07.b1 PHD_FILE: MSMg01no404_f07.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:18:57 2005 | CHROMAT_FILE: MSMg01no404_f07.g1 PHD_FILE: MSMg01no404_f07.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:18:58 2005 |
singlet/doublet | doublet | doublet |
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BLAST hit | unique | unique |
---|
Map location. | (152,234,848 - 152,235,070) | (152,043,164 - 152,043,282) |
---|
sequence | TTTGCGGTCGTTAAAAGACTCACTATTCCGAGAGGATCCGCGGAATTCAG
GTCCTTCCGCGTATACAGCAAGCATTCTACCAAACGAGCCTTCTCCTCAG
CCCTGGGAAGTTAATCTTTAAACAGATGGAGTCACCACTATGGGAGTTCA
GATCCAACAAAACAACCAGAGCTGCTTTTAAGGGAGCAGGTGGACCAGGA
TGGAAAGTGGGGGACTCCATCCAGCCCAGCAGGTAGCAGAGACAGATTCA
GCTCCCTCGTGGTGGGGGTCGAGGGTGGGGGTAAGGGGAGGTTTACNTTT
CTTTTCTTCCATTTTTTTTTTTACTACTTTTCTCCTCACTTATTCCCACC
CCCTTTTCTACCTCTCTCCCCTTTACCCCCCTCTAATTTTTCTTTCCTTT
ATTCCTTCCCCCCACTCACCCTCATTATTTTCCCCCTTCCCTCCTTTTCT
CTTTTTTTTTTTCCCACTTTTATTCTACATTTTACCTTTCTTTCCCCCCA
TATTCCACCTCCATTCTACCCTTCCCCCCCCTCTTTCCTCTTTTTCCCCC
TCACCACACCCCCCCTTTTCTACTCCTTCCCCCCCCTCATTCCTTCCTTC
CCCCCCCCCCCTTTTTTTTTCCCTTTCTTCCTCCCCTCCTTTTTCCCCAT
TTTCCCCCCTTTCCCTTTCCTTTTCTTTCCCCCCCTCTCTCTTCACCATT
TTTCTCTTCCCCTTTCTTTCCCCCTCTTTCCTCCTACTTTCCTTTCCCCC
CCCCACTTTTTTTTCCCCTCTTTTCTATCCCTATCTTTTTTCTTTCTTTC
CTCCCCCCCTTTCTTTTTTTTTTTTCCCCC
| TTGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCAAGCCGTGAGCCAGCCCTGGCACAAAGGGCCA
CACACTGCTAGGCTGATCCCTCGAGTCCCTAGAGCCCTAAGCTCTACCGG
ATGTGGCTCAAAGGGGTGGGGGTTGGGGGGGGGAGAATTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTCTTTCCTCTTCTTTTTTTTTTCTTTTTT
TTTTTTTTTTTTTTTTTTTCTTTTTTACACTTTCTTTTCTTTTTTCCATT
TTCTTTTTTTTTTTCCCCCCCCTTTTCTCCTTTTTTTTTTTTTTTTTTTT
TTTCCCTTTTTTCTTCTCTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTT
TTTTCCTTTTTTCTTTTCTTTTTTTTTTTTCTTTTCCTTTTTCTTATTTT
TTTTTTTTTTTTTTTTCCTCCTTCTTTTTATTTTCTTTTTTTTCTCTTTT
TTTTTTTTATTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTCCTCTTTTT
TTTTTTTTTTTTCTCCCCTTTTCTTTTTTTCCTCCTTTTTTTTTTTTTTT
TATTCCTTTTATTTCTTTTTATCCTCTTTTTTTTTTTTTTTTTCTTATTC
CTCTTTTTATATTTCTCCTTTTATTTTTTCCCCCTCTCTTTTTTTTTTCT
ATTCTTCTTTTTTTTTTTCCTTTTTCTCATTCTTATCTGCTTTTTTCTTT
TTTCTTTTTTTTTTTATTTCCCTCCTTCTATTTTTTTTCTTCTCN
|
quality values | Open.Hide. 9 9 9 12 15 18 12 12 11 8 8 8 8 8 8 9 10 11 9 9 15 13 12 11 10 9 9 11 9 9 9 11 11 16 16 21 24 24 33 28 37 37 28 35 26 26 24 24 37 37
23 19 8 8 6 8 8 9 9 9 15 15 28 19 22 13 17 16 16 20 23 23 36 33 40 40 43 43 42 34 34 32 32 32 47 43 48 48 48 57 59 57 68 68 57 42 42 34 34 34
42 59 59 42 41 35 37 39 39 37 37 46 57 44 48 48 57 59 59 43 38 38 41 41 37 42 43 37 37 44 44 57 57 57 57 57 57 68 57 59 50 43 41 43 43 44 50 44 46 41
41 50 50 50 50 43 37 35 35 43 43 50 43 52 52 52 52 52 52 52 52 57 59 59 68 68 59 59 57 52 52 52 52 52 57 52 52 52 52 52 43 43 35 35 43 43 30 43 43 43
43 37 37 43 43 43 43 28 27 23 32 32 35 35 42 43 57 48 47 42 42 35 35 42 44 57 57 57 48 44 44 43 42 42 42 42 39 43 43 44 44 44 37 35 35 39 43 43 54 54
57 59 47 48 48 54 44 42 35 39 37 37 32 35 35 42 42 43 43 43 47 47 39 35 35 37 37 35 35 28 28 23 28 32 32 24 28 23 19 19 17 13 10 9 9 3 0 3 13 17
22 18 15 16 19 13 10 9 8 8 8 8 10 10 9 9 9 9 12 12 13 12 15 10 9 8 8 8 10 13 12 11 11 12 8 8 6 7 10 10 9 10 10 15 12 15 10 10 10 12
13 15 10 10 10 13 9 6 6 6 6 10 8 9 9 10 11 14 17 13 8 8 8 6 10 10 10 10 10 10 10 8 8 8 8 8 9 11 9 9 9 9 10 12 17 12 9 9 10 7
7 7 10 8 15 14 10 10 11 12 12 10 11 11 10 10 10 9 8 8 6 6 8 8 8 8 9 8 8 8 8 11 14 13 14 10 10 10 10 14 10 9 11 9 9 9 10 6 7 7
7 8 8 9 9 12 15 21 23 18 15 22 21 11 6 6 6 8 10 10 12 12 10 11 10 10 9 9 9 9 9 8 8 6 6 12 13 11 12 8 8 10 16 16 19 14 12 13 10 10
10 10 10 14 10 10 9 9 10 8 10 8 8 8 10 10 8 8 8 10 11 11 11 13 13 10 12 15 10 8 8 8 8 8 8 8 8 8 8 8 8 14 9 9 8 8 10 12 10 6
6 6 6 6 8 8 6 7 7 8 10 10 9 10 10 13 12 16 12 13 10 9 9 8 8 8 8 10 10 16 18 22 19 9 8 8 8 8 8 11 11 11 11 15 12 14 13 19 15 11
9 8 8 8 8 9 13 18 19 19 21 22 24 30 30 29 20 18 13 12 10 13 10 10 10 8 8 8 8 9 13 13 14 13 10 10 10 10 9 9 26 19 15 8 8 8 10 6 6 8
12 11 10 9 12 14 23 25 24 18 10 8 8 8 8 10 12 8 10 9 9 9 14 20 16 10 10 10 10 10 13 24 18 13 15 8 8 8 8 8 9 9 10 10 10 12 12 14 14 22
22 13 8 8 6 8 8 16 18 15 9 9 13 12 8 8 8 8 8 11 19 21 15 11 8 8 13 11 10 10 10 8 10 8 6 6 6 6 6 8 8 8 10 12 18 18 18 18 22 22
27 22 12 6 7 6 8 8 10 10 14 7 14 7 7 8 8 10 10 10 9 8 6 6 8 8 6 9 9 9 9 9 10 10 11 11 10 10 19 19 12 10 8 13 10 10 10 8 8 9
11 11 8 13 8 9 9 9 13 8 8 8 12 12 22 28 26 24 24 21 21 20 35 18 17 13 10 8 8 8 | Open.Hide. 8 13 7 7 8 8 10 10 27 34 37 41 41 41 50 50 50 47 59 29 27 9 9 9 9 9 9 9 7 7 10 10 11 18 20 18 13 15 30 30 47 47 37 37 39 37 42 41 25 27
9 9 9 9 9 9 9 11 11 11 16 13 18 25 29 30 30 30 30 30 35 59 59 57 57 57 57 42 42 37 34 34 34 37 43 40 37 28 29 28 29 28 36 36 43 43 41 48 48 68
50 50 50 50 50 50 36 43 28 32 30 25 25 36 44 57 54 57 44 44 30 28 28 37 40 57 59 68 68 68 68 68 68 68 68 68 59 59 41 39 37 44 48 57 42 42 37 41 37 42
42 48 50 46 57 57 57 57 59 47 43 43 47 59 59 59 59 48 48 48 48 48 48 47 43 43 43 37 30 24 21 18 19 13 11 18 9 9 13 17 12 9 10 10 13 15 14 13 18 10
13 13 26 10 10 8 8 8 13 9 10 15 8 12 12 26 19 28 17 15 8 8 8 10 10 9 9 8 8 8 8 8 8 10 19 19 22 17 14 14 23 15 6 6 6 10 10 23 19 24
18 18 9 10 11 23 17 15 10 10 10 15 17 9 10 10 13 13 10 12 10 22 21 10 9 8 8 8 8 10 13 19 10 9 10 12 19 18 14 9 12 12 21 19 23 21 15 15 11 18
13 16 11 11 16 17 25 25 23 21 18 16 21 19 22 15 10 10 10 10 11 11 11 13 10 8 8 10 8 10 10 8 10 10 19 12 12 12 13 13 15 24 17 24 28 22 24 19 24 20
11 8 8 8 8 8 10 10 19 17 17 10 11 8 8 6 6 10 8 8 10 19 8 8 6 8 6 10 10 10 13 12 15 15 16 15 12 12 30 17 12 12 8 8 8 11 15 10 10 10
12 12 11 12 12 11 11 9 10 10 19 9 8 8 8 8 8 8 12 15 24 33 31 31 39 39 35 26 13 10 9 9 13 8 13 14 10 10 14 16 15 8 8 8 8 8 10 10 12 30
26 26 17 13 13 17 17 24 19 14 17 21 14 8 10 6 6 8 8 10 10 8 8 8 12 22 22 17 8 8 8 15 13 8 8 8 8 10 17 20 21 21 10 10 10 10 10 10 11 18
19 14 12 14 14 17 17 9 9 10 15 13 12 12 29 29 18 15 10 8 8 8 25 16 12 9 9 16 16 22 19 21 20 25 15 13 8 8 8 15 10 8 8 8 8 10 13 27 27 14
14 19 19 16 11 13 19 19 28 13 13 8 8 8 8 8 10 11 11 21 13 9 9 9 13 12 21 16 22 16 13 13 14 12 12 12 16 15 15 16 23 19 12 12 17 13 13 16 10 10
10 8 8 7 7 9 9 12 14 8 9 8 8 11 11 15 18 28 25 9 8 8 8 8 6 7 7 15 24 33 37 19 19 12 12 16 19 15 11 11 13 13 10 8 8 11 11 8 8 8
6 6 8 6 11 12 12 11 6 6 6 6 11 8 9 9 9 9 9 13 10 8 9 8 13 13 14 10 9 8 8 13 12 12 8 11 6 6 8 8 8 9 11 11 18 23 22 8 6 6
6 8 6 8 8 8 9 10 10 16 14 22 20 22 24 27 30 15 12 10 10 13 10 9 8 8 8 8 8 8 8 8 8 10 10 9 8 8 8 6 8 19 19 15 7 7 8 8 23 25
21 15 7 6 6 9 9 18 23 20 22 20 17 15 8 8 8 8 10 8 8 8 8 8 8 8 8 8 9 12 12 23 22 28 26 22 11 10 8 10 8 8 6 3 0 |