Query= MSMg01no404_f08.b1 MSMg01no404_f08.b1 CHROMAT_FILE:
MSMg01no404_f08.b1 PHD_FILE: MSMg01no404_f08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:58 2005
(394 letters)
>mm_chr7_137633739_137634532
Length = 794
Score = 739 bits (382), Expect = 0.0
Identities = 391/394 (99%), Gaps = 1/394 (0%)
Strand = Plus / Minus
Query: 1 agcataaatgatagaacagttgcatgccgaaaggtctgttttctttgatcagtatactac 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 431 agcataaatgatagaacagttgcatgctgaaaggtctgttttctttgatcagtatactac 372
Query: 61 cactcagaggttaactactgtagagtaattttaattattttgcacagataatgagaatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cactcagaggttaactactgtagagtaattttaattattttgcacagataatgagaatct 312
Query: 121 ttcaagaggcatttcaaaaggcaacatcctgtggttgttggcccatttgtgaatcccaag 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttcaagaggcatttcaaaaggcagcatcctgtggttgttggcccatttgtgaatcccaag 252
Query: 181 tgttattaatgccaggattctcttgaagaattgggtagaaagcagaactcatttttttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 251 tgttattaatgccaggattctcttgaagaattgggtagaaagcagaactca-ttttttta 193
Query: 241 aacatttatttattattatatgtaagtatactgtagctgtcttcagaaaccagaagagcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aacatttatttattattatatgtaagtatactgtagctgtcttcagaaaccagaagagcg 133
Query: 301 tcagatctcattacagatggttgtgagccaccaccatgtggttgctgggatttgaactca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tcagatctcattacagatggttgtgagccaccaccatgtggttgctgggatttgaactca 73
Query: 361 ggacctccggaagagcagtcggctctcttaaccg 394
||||||||||||||||||||||||||||||||||
Sbjct: 72 ggacctccggaagagcagtcggctctcttaaccg 39
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space: 302225
Effective search space used: 302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no404_f08.g1 MSMg01no404_f08.g1 CHROMAT_FILE:
MSMg01no404_f08.g1 PHD_FILE: MSMg01no404_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:58 2005
(390 letters)
>mm_chr7_137471359_137472148
Length = 790
Score = 716 bits (370), Expect = 0.0
Identities = 385/390 (98%)
Strand = Plus / Plus
Query: 1 ctgggctcatcctctccccagcccaacccagaaacactgtgacaaatcaggctaaacccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgggctcatcctctccccagcccaacccagaaacactgtgacaaatcaggctaaacccc 260
Query: 61 ccaaggtcttgctgtgaatgtaatccacatgcaaggtctgggctgcagctgcccgagagg 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaaggtcttgctgtgaatgtaatccacatgcaaggtctgggctgcagctgcccgagaga 320
Query: 121 actgcctagtagcacttgagggctagagatttaatgaccagtgtcctcctgttccatcag 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 actgcctagtagcacttgagggctagggatttaatgaccagtgtcctcctgttccatcag 380
Query: 181 tttgtggcccctcctgccataggactgagaagagaattaagtcctgagccaagacattga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgtggcccctcctgccataggactgagaagagaattaagtcctgagccaagacattga 440
Query: 241 gtgcagatatcacaccgtagcctggccacaggaaagaggactttccccttcttctctgag 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgcagagatcacaccgtagcctggccacaggaaagaggactttccccttcttctctgag 500
Query: 301 cctgtggtaggtgacggccccgcatattcacagcataaagcaggatggcagtctcctgcc 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgtgggaggtgacggccccgcatattcacagcataaagcaggatggcagtctcctgcc 560
Query: 361 cccagagttccatttccatgtgcactacag 390
||||||||||||||||||||||||||||||
Sbjct: 561 cccagagttccatttccatgtgcactacag 590
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
