Query= MSMg01no405_c18.b1 MSMg01no405_c18.b1 CHROMAT_FILE:
MSMg01no405_c18.b1 PHD_FILE: MSMg01no405_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:04 2005
(418 letters)
>mm_chr7_37267427_37268238
Length = 812
Score = 704 bits (364), Expect = 0.0
Identities = 402/418 (96%), Gaps = 6/418 (1%)
Strand = Plus / Minus
Query: 1 gtgtatagatcatattcatccccatgcctccccgggtcctgccttctacattcctcttcc 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 612 gtgtatagatcatattcatccccatgcctccccgggccctgccttctacattcctcttcc 553
Query: 61 ccctccccacacaactttatattctgtttattaaacccactgagttcaatttgtgtatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ccctccccacacaactttatattctgtttattaaacccactgagttcaatttgtgtatca 493
Query: 121 gaccctttcacactacacaccagcatcaacacagcactgaatccaccgcaagcaaacttt 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 492 gaccctttcacactacacaccagcatcaacacagcactgaatccaccacaagcgaacttt 433
Query: 181 ccaattgccttaataagatgtatttttatgataccaatgaaggctagacacaagaggagg 240
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 432 ccaattgccttaataagatgtatttttatgataccaatgaaggctggacactagaggagg 373
Query: 241 gatggacccaaagatataccacagtaagtcctacctgggagaacagctgacccaagggga 300
|||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 372 gatggacccaaagagaaaccacagtaagtcctacctgggacaacagctgacccaagggga 313
Query: 301 ggcatacagaccaaccatggaggaggaagagggcaaggagaagatcaggggtcagctgcc 360
||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 312 ggcatacagaccaaccatgga------agagggcaaggagaagatcaggggtcagctgcc 259
Query: 361 tttggggatacttgccctgatgtcaccatggagaaagcacggggtcaggcaagtctcc 418
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tttagggatgcttgccctgatgtcaccatggagaaagcacggggtcaggcaagtctcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 812
Length adjustment: 9
Effective length of query: 409
Effective length of database: 803
Effective search space: 328427
Effective search space used: 328427
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_c18.g1 MSMg01no405_c18.g1 CHROMAT_FILE:
MSMg01no405_c18.g1 PHD_FILE: MSMg01no405_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:04 2005
(296 letters)
>mm_chr7_37056284_37056979
Length = 696
Score = 565 bits (292), Expect = e-165
Identities = 295/296 (99%)
Strand = Plus / Plus
Query: 1 aggcattaacctctacagggtttataatttgtgtgctgggaattgaacccacagcttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggcattaacctctacagggtttataatttgtgtgctgggaattgaacccacagcttctt 260
Query: 61 atacgcaaggcaagctctttgccaccaagctattttctttattgttttctggtgctctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atacgcaaggcaagctctttgccaccaagctattttctttattgttttctggtgctctca 320
Query: 121 cactgtgaattaatgaagttggaaaccttgtatagaagaaatccagacattaacgttgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactgtgaattaatgaagttggaaaccttgtatagaagaaatccagacattaacgttgct 380
Query: 181 cctccaaacccaaggggactctttctctctctcctgctctgaggaatttcacagtcatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctccaaacccaaggggactctttctctctctcctgctctgaggaatttcacagtcatgg 440
Query: 241 aatggcagagattttggagttttgcaaaatcgcactttacaggatgtgtattgctg 296
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgtcagagattttggagttttgcaaaatcgcactttacaggatgtgtattgctg 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
