Query= MSMg01no406_k16.b1 MSMg01no406_k16.b1 CHROMAT_FILE:
MSMg01no406_k16.b1 PHD_FILE: MSMg01no406_k16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:03 2005
(464 letters)
>mm_chr7_114059514_114060377
Length = 864
Score = 799 bits (413), Expect = 0.0
Identities = 452/467 (96%), Gaps = 6/467 (1%)
Strand = Plus / Plus
Query: 1 actatcaacaaactttgatttaataattcatctaattcttgcctcactgaggttaactat 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actaccaacaaactttgatttaataattcatctaattcttgcctcactgaggttaactat 260
Query: 61 tcttcgtccccctgagttattcataaatcccttgttctctcttgttctcttccttatggt 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttcgtccccctgaattattcataaatcccttgttctctcttgttctcttccttatggt 320
Query: 121 cctttcagtctgatttattattcaggactgacttgcagagtaacagttgtatatggtgtg 180
|||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 321 cctttcagtctgatttattattcaggactggcttgcagagtaacagttggatatggtgtg 380
Query: 181 gcggggggcatatatcttcctctattttgtccccttctatgccttcgttgtttanat--- 237
||||||| ||| |||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 381 gcggggg-catgtatcttcctctattttgtccccttctatgccttctttgttta--ttac 437
Query: 238 actcatctactgcttctagatctatgcaaaaatgattcttaacgtcttgcctttaccatg 297
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 438 actcatctactgcttctagatctatgcaaaaatgattcttaatgtcttgcctttaccatg 497
Query: 298 tcataattagacttttctctcttatggtcactagtgataaattactgaggtgatttattt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tcataattagacttttctctcttatggtcactagtgataaattactgaggtgatttattt 557
Query: 358 ttgaggagctgcatttctatgatatggcagtgatgatgttacaactgaagtttgtctact 417
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ttgaggagctgcatttctatggtatggcagtgatgatgttacaactgaagtttgtctact 617
Query: 418 ctctttgtggtacttgggaataaaccctcgagagagcgctatttact 464
|||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 618 ctctttgtggtacttgggaataaaccctcgagagagtgctatttact 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no406_k16.g1 MSMg01no406_k16.g1 CHROMAT_FILE:
MSMg01no406_k16.g1 PHD_FILE: MSMg01no406_k16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:04 2005
(241 letters)
>mm_chr7_114217700_114218340
Length = 641
Score = 458 bits (237), Expect = e-133
Identities = 240/241 (99%)
Strand = Plus / Minus
Query: 1 tttgatttaggtctaaagtaagtgaggcttaacgacacatagaaaagagagacaacgacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgatttaggtctaaagtaagtgaggcttaacgacacatagaaaagagagacaacgacg 382
Query: 61 agatgtgaggaacaggtggagaaggctttgtgtttccctttagctgatggaatcttgagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatgtgaggaacaggtggagaaggctttgtgtttccctttagctgatggaatcttgagg 322
Query: 121 atggaagctgcaatgagagtgtatgaacataggatcagcaggcagggtatcatgacaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggaagctgcaatgagagtgtatgaacataggatcagcaggcagggtatcatgacaacc 262
Query: 181 agaatagtcccgacaatggcatagacctcaaaccgggctgtgtctgcacagaccagcctc 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaatagtcccaacaatggcatagacctcaaaccgggctgtgtctgcacagaccagcctc 202
Query: 241 a 241
|
Sbjct: 201 a 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
