Query= MSMg01no406_n06.b1 MSMg01no406_n06.b1 CHROMAT_FILE:
MSMg01no406_n06.b1 PHD_FILE: MSMg01no406_n06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:16 2005
(534 letters)
>mm_chr7_37444516_37445449
Length = 934
Score = 961 bits (497), Expect = 0.0
Identities = 528/545 (96%), Gaps = 11/545 (2%)
Strand = Plus / Plus
Query: 1 tggcctgggctataatttcagtgcttgggagaatggggcaggaagattgggaacattcca 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tggcttgggctataatttcagtgcttgggagaatggggcaggaagattgggaacattcca 249
Query: 61 ggacagcctgggctacataatgaatccctgtctcaaaaaaaaaaaaaaa----------- 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ggacagcctgggctacataatgaatccctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaa 309
Query: 110 tccaatgacgagtccctggtgagttggtcctcaccttcaactgatgtgacccttgaagac 169
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 310 tccaatgacgagtccctggtgagttggtcctcaccttcaactgctgtgacccttgaagac 369
Query: 170 agttcctcaggttgtggtgagacccccaaccataacatttcattgctacttcattactgt 229
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 370 ggttcctcaggttgtggtgagacccccaaccataacatttcaatgctacttcattactgt 429
Query: 230 aattttgctaccattatgaattgtaatgtaaatatccaacaatcaggatagctgatagct 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aattttgctaccattatgaattgtaatgtaaatatccaacaatcaggatagctgatagct 489
Query: 290 agacccctgtgaaaaggtcattagactccccaaaggggtctcgacccacaggttgagaac 349
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 490 agacccctgtgaaaaggtcattagactccccaaaggggtatcgacccacaggttgagaac 549
Query: 350 tcctgtcattggcccagctaaggctgcaaaccctgttttgaaatagtaagtagaagaggt 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tcctgtcattggcccagctaaggctgcaaaccctgttttgaaatagtaagtagaagaggt 609
Query: 410 ctcacacttgcagttctgtgagagggggaagggtctagaagctgcgtgttcaatggtttt 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ctcacacttgcagttctgtgagagggggaagggtctagaagctgcgtgttcaatggtttt 669
Query: 470 cttctaaaggatccttttccgaggccagctaccacggtgctaatgggacgttttggctga 529
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 670 cttctaaaggatccttttccgaggccagctaccacggtgctaatgggactttttggctga 729
Query: 530 ccatg 534
|||||
Sbjct: 730 ccatg 734
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no406_n06.g1 MSMg01no406_n06.g1 CHROMAT_FILE:
MSMg01no406_n06.g1 PHD_FILE: MSMg01no406_n06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:17 2005
(246 letters)
>mm_chr7_37472438_37473083
Length = 646
Score = 294 bits (152), Expect = 3e-84
Identities = 189/220 (85%), Gaps = 29/220 (13%)
Strand = Plus / Minus
Query: 1 cacccaaatcctcaactcttctcttttcggtttctttctctctg---------------- 44
|||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 433 cacccaaatcctcaactcttctcttttcagtttctttctctctgtttttttttttttttt 374
Query: 45 -------------tttttttggaggggtgatggttgctgagcatgaacagagggccgtga 91
||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tttttttttttttttttttttgaggggtgatggttgctgagcatgaacagagggccgtga 314
Query: 92 acaggtgaggcaggtgctctacagctgagtcacagataaatgttagacagtgacatccct 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 acaggtgaggcaggtgctctacagctgagtcacagataaatgttagacagtgacatccct 254
Query: 152 gcctctgatacacacacacacacacacacacacacacaca 191
||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gcctctgatacacacacacacacacacacacacacacaca 214
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
