Query= MSMg01no407_m06.b1 MSMg01no407_m06.b1 CHROMAT_FILE:
MSMg01no407_m06.b1 PHD_FILE: MSMg01no407_m06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:30 2005
(589 letters)
>mm_chr7_36996160_36997147
Length = 988
Score = 1077 bits (557), Expect = 0.0
Identities = 578/585 (98%), Gaps = 1/585 (0%)
Strand = Plus / Minus
Query: 5 gaattcccccatagggggcttaagaaagaaattaaacatggctttcctgagctgcttcct 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 gaattcccccagagggggcttaagaaagaaattaaacatggctttcctgagctgcttcct 729
Query: 65 gctgtttttctacttcattggtttcccttccacaattgcctatgttcctccagtcacatg 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 728 gctgtttttctacttcattggtttcccttccacaattgcctgtgttcctccagtcacatg 669
Query: 125 acatcttactacgcctgagttatttcagaaaacttctggggcatctgtcaccaatttgga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 acatcttactacgcctgagttatttcagaaaacttctggggcatctgtcaccaatttgga 609
Query: 185 ggtgaacaactgtagggatgatcatgttagtgatacctgtgacgagatgcccttcatgtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ggtgaacaactgtagggatgatcatgttagtgatacctgtgacgagatgcccttcatgtt 549
Query: 245 tacttgtctaccactattttctttatggtttggctcatttgacccatctgaaatctgctc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tacttgtctaccactattttctttatggtttggctcatttgacccatctgaaatctgctc 489
Query: 305 catccagtcctacaagcagccaatcccaaccctgtttcctctctcatttcaccacactgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 catccagtcctacaagcagccaatcccaaccctgtttcctctctcatttcaccacactgg 429
Query: 365 ctgtcttgtcaagctcttctttaggccgggttccctgctgctactccgtctgataggtgc 424
||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||
Sbjct: 428 ctgtcttgtcaagctcttctttaggccaggttctctgctgctactccatctgataggtgc 369
Query: 425 tccatctgtgaattaagatatctagattttttttcccaagacctaaccacacctttctct 484
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 368 tccatctgtgaattaagatatgtagattttttt-cccaagacctaaccacacctttctct 310
Query: 485 tcttgcttctatgctcctgagattgccatctccttcagctttaagcatcatctacccaca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tcttgcttctatgctcctgagattgccatctccttcagctttaagcatcatctacccaca 250
Query: 545 tgtccagaactcacctccttggtacaggacacagggtgctaaact 589
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tgtccagaactcacctccttggtacaggacacagggtgctaaact 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 988
Length adjustment: 10
Effective length of query: 579
Effective length of database: 978
Effective search space: 566262
Effective search space used: 566262
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_m06.g1 MSMg01no407_m06.g1 CHROMAT_FILE:
MSMg01no407_m06.g1 PHD_FILE: MSMg01no407_m06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:30 2005
(395 letters)
>mm_chr7_36802269_36803063
Length = 795
Score = 741 bits (383), Expect = 0.0
Identities = 392/395 (99%)
Strand = Plus / Plus
Query: 1 aataaaatggaggtgatctgtgcttatttatagggcaaatggatacatccagccccggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataaaatggaggtgatctgtgcttatttatagggcaaatggatacatccagccccggcc 260
Query: 61 gtcagagcctaactttctcatttacactgtacagcccatctctgtacccagagtggttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcagagcctaactttctcatttacactgtacagcccatctctgtacccagagtggttct 320
Query: 121 gggagctgtgagcaacggcagcagaggcagaaaccagagcagtgctggcgatatgtgcat 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 gggagctgtgagcaacggcagcagaggcagaaaccagaacagtgctggcgatatgtgcat 380
Query: 181 accgctcttcatctgaggttctagaatcttccaagctaattgctgtaagggtttttgttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accgctcttcatctgaggttctagaatcttccaagctaattgctgtaagggtttttgttc 440
Query: 241 ttgtgtactgaaaacccacggctgcaaacacttccttatttacacctcacttttgaggct 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtgcactgaaaacccacggctgcaaacacttccttatttacacctcacttttgaggct 500
Query: 301 gaaagacaggaaatgggataaaattaattgccatttctcacacctctgaaacaataaatt 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 gaaagacaggaaatgggataaaattaattgccatttctcagacctctgaaacaataaatt 560
Query: 361 tcagccatcataaatctggaggtgagttaagtact 395
|||||||||||||||||||||||||||||||||||
Sbjct: 561 tcagccatcataaatctggaggtgagttaagtact 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
