TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCAAATTTCATGCACTTTAATATTTTCCTTGTTAAGATACCCATTCT
CCCATAAGATTAAGTAAAAACTTAATTCCTCAATATTAAAGACTTTTCAG
GGTATTATTTAAAAATAAAACCCACAAAATACTACTTATATATCAAATAT
GCTTCATTCTTTTTTTATTCCCTATGAGTTCCTACCTCAAAACACATGAT
TTTATTTTTCTAAATTATGATTTGTTATGAATAATTAATGAAACAATCTC
TAGACTTAGAGATGAGAGACAGAGCTTTTGAGTATTCAGTTCTGAAACCA
GTTTAATCTTAGGCAATTATCTAAAGTTTTTGAGTTTCACCTACTGGAAA
AGGAAGTATTCGAAGGGAAAATAAGGCTTAACCGGTTCATCTATCCTTAA
AGTTCTGAGGTATCAGCTGAAAAAGCTCAGAGTTAGACACTCAGTCTCTT
GCCCTCTCTTCCTCTCTTCATTCTTACATTGTGTTCTAGTAACATTTATC
AAAATTGGAGTTCTGCTTTCCAGAAGGAACTGAAGATCTATTGCTTTAGG
GAATAATACAATGGTCTTCAATAATCCCTCATAATGACACAAATATCTTG
AGCCCATGAGCTAGATAAAGGGAAATTCCTGGAAGGTAACAGGGCACCGG
GCACAAAGGTGGGCCTATCTTTTTGTGCCAACCTTGTTATTCGGAAT

ATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGA
GAAGCACCTGAAAAAATGCTCAACATCCTTAATCATCAGGGAAATGCAAA
TCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATC
AAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAAC
ACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCTCTCTGGAAAT
CAGTCTGGTGGTTCCTCAGAAAACTGGATATAGTACTACCTGAGGATCCA
GCAATACCTCTCCTGGGCATATATCCAGAAGATGCCAAAACTGGTAAGAA
GGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAA
GCTGGAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATG
TGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATT
TATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCTTCATCCTGAGTG
AGGCAACACATTTCCAAGGGACTCACCCATATTGTATCCCCGATAATGGA
TATTAGCCCAAACCTATGATTCCCCGAATTTAAAAACCAATTTTCTAATC
CCTGGAATTCGGGTTAATGCAAACTGGTATGGTATATTTCGGC

Query= MSMg01no408_o03.b1 MSMg01no408_o03.b1 CHROMAT_FILE:
MSMg01no408_o03.b1 PHD_FILE: MSMg01no408_o03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:01 2005
         (546 letters)



>mm_chr7_61998650_61999595
          Length = 946

 Score = 1027 bits (531), Expect = 0.0
 Identities = 540/543 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctcaaatttcatgcactttaatattttccttgttaagatacccattctcccata 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ggaattctcaaatttcatgcactttaatattttccttgttaagatacccattctcccata 687

                                                                       
Query: 64  agattaagtaaaaacttaattcctcaatattaaagacttttcagggtattatttaaaaat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 agattaagtaaaaacttaattcctcaatattaaagacttttcagggtattatttaaaaat 627

                                                                       
Query: 124 aaaacccacaaaatactacttatatatcaaatatgcttcattctttttttattccctatg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aaaacccacaaaatactacttatatatcaaatatgcttcattctttttttattccctatg 567

                                                                       
Query: 184 agttcctacctcaaaacacatgattttatttttctaaattatgatttgttatgaataatt 243
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 566 agttcctacctcaaaacacatggttttatttttctaaattatgatttgttatgaataatt 507

                                                                       
Query: 244 aatgaaacaatctctagacttagagatgagagacagagcttttgagtattcagttctgaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aatgaaacaatctctagacttagagatgagagacagagcttttgagtattcagttctgaa 447

                                                                       
Query: 304 accagtttaatcttaggcaattatctaaagtttttgagtttcacctactggaaaaggaag 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 accagtttaatcttaggcaattatctaaagtttttgagtttcacctactggaaaaggaag 387

                                                                       
Query: 364 tattcgaagggaaaataaggcttaaccggttcatctatccttaaagttctgaggtatcag 423
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 386 tattcgaagggaaaataaggcttaaccggttcatctttccttaaagttctgaggtatcag 327

                                                                       
Query: 424 ctgaaaaagctcagagttagacactcagtctcttgccctctcttcctctcttcattctta 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ctgaaaaagctcagagttagacactcagtctcttgccctctcttcctctcttcattctta 267

                                                                       
Query: 484 cattgtgttctagtaacatttatcaaaattggagttctgctttccagaaggaactgaaga 543
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 266 cattgtgttctagtaacatttatcaaaatttgagttctgctttccagaaggaactgaaga 207

              
Query: 544 tct 546
           |||
Sbjct: 206 tct 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space:   501696
Effective search space used:   501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)