Query= MSMg01no410_l23.b1 MSMg01no410_l23.b1 CHROMAT_FILE:
MSMg01no410_l23.b1 PHD_FILE: MSMg01no410_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:34 2005
(500 letters)
>mm_chr7_126742676_126743575
Length = 900
Score = 600 bits (310), Expect = e-175
Identities = 346/358 (96%), Gaps = 1/358 (0%)
Strand = Plus / Minus
Query: 4 gaattctttctcaatctctcgttcttataaagccactaatcccatcacgagggatccacc 63
|||||||||||||||| || |||||||||||||||||||||| |||| ||||||||||||
Sbjct: 534 gaattctttctcaatcact-gttcttataaagccactaatcctatcatgagggatccacc 476
Query: 64 ttcatgaactccacttatcctggataagaaggccagttcaagtacagtcaacatatgaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ttcatgaactccacttatcctggataagaaggccagttcaagtacagtcaacatatgaac 416
Query: 124 ttgggcacaatttaatcctatccatcaaattctttcaacacccaagttcttcaactaaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ttgggcacaatttaatcctatccatcaaattctttcaacacccaagttcttcaactaaag 356
Query: 184 gtcttacatgtattggagcgtgtatgtgtgtgtttgtgtgtgagtgcacacatgtattcc 243
|||||||||||||| |||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 355 gtcttacatgtattagagcttgtatgtgtgtgtttgtgtgtgtgtgcacgcatgtattcc 296
Query: 244 actactattctttcaaattctcagcccacagaatttgtattcatagtgaaatggttgttt 303
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 295 actactattctttcaaattctcagcccacagaatttgtaaacatagtgaaatggttgttt 236
Query: 304 taaatggccctgtttgaggtttattttttatgccaaagtatgcaaacatgataggctg 361
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 235 taaatggccctgtttgaggttaattttttatgccaaagtgtgcaaacatgataggctg 178
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no410_l23.g1 MSMg01no410_l23.g1 CHROMAT_FILE:
MSMg01no410_l23.g1 PHD_FILE: MSMg01no410_l23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:34 2005
(459 letters)
>mm_chr7_126529796_126530654
Length = 859
Score = 833 bits (431), Expect = 0.0
Identities = 452/459 (98%)
Strand = Plus / Plus
Query: 1 attttttaaaaacatttcatttcttgttcaggattttaatgaagaccactttttaaaagc 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttttttaaaacatttcatttcttgttcaggattttaatgaagaccactttttaaaagc 260
Query: 61 tatatctgagggaagcagaaagctgactccaggtaaatggcaggtgcgcatggatcgact 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 tatatccaagggaagcagaaagctgactccaggtaaatggcaggtgcgcatggagcgact 320
Query: 121 ctccacgggttctttctttccttgcacctcttgagggcagagaggcagttgaaggttcta 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 ctccacgggttctttctttccttgcacctcttgagggcagagaggcagctgaaggttcta 380
Query: 181 gatctgctcaagaactacagacctagtttccctaagccacaacaccaggaacggtactgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatctgctcaagaactacagacctagtttccctaagccacaacaccaggaacggtactgg 440
Query: 241 gacgtaagccaagccttgcaaaccaaccaacaaaacaaaacaacctttatgctgtatacc 300
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 441 gacgtaagccaagccttgcaaagcaaccaacaaaacaaaacaacctctatgctgtatacc 500
Query: 301 cctgggcttttgaagcagttttggaggaggatgggaggaacaagaactcaaatggtagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgggcttttgaagcagttttggaggaggatgggaggaacaagaactcaaatggtagag 560
Query: 361 cccttgattgcatgcattgaattaaaccagaccccagtgactatgcttctgtaactcacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccttgattgcatgcattgaattaaaccagaccccagtgactatgcttctgtaactcacc 620
Query: 421 tgcttgttcaggatggcgtctggtgctctccatgatgta 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgcttgttcaggatggcgtctggtgctctccatgatgta 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
