ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTGGTTGTGTCAGCACCCTCCATGCAGACAAAGAGAGGGACAAAAAA
TATGCAAATTTCTAGTAAAAAAACAAATTCACACTTTTCTTAAAGCAGAA
AGCCTTCCTATGATTTAAACCAAGCAGTCTGCCTGAGTAATGGTCTTATA
TGTAAGTGGAAATCCTTTTTGATATTTACACTACTGATTTCTTTAATCTC
CACTTTGGAATTAACAGACAATAACACCACATTGCTCCCTGGTACTTGTG
CATATTTACCCAAGTGTCTACAGTGAGGATTGTACACAGATCTCTAATCC
ACCTGCCCGTGTTACTTAAAAGCCCAGATAAAATCAGCAACCCTTAGATC
TTAACCTTTTAAGTCTGAAATGTTTTTAAAGTCTGGCCATGGCAACCGAA
GCTGGGGGTGGAGGGGGGAATGCACATTGGGAAGGAGTAGAAGACCAGGG
AGACATGAAACTGTAGGAGGATTGCTACATCAGAAAGCTCTCAGCTTGAA
CCACCGTTGCATTAAATAAATCAAAAACTGTTATAATAATGGTGACTGTG
TCCATAAGTGGGAGGGTAACCTCGGCAGACAGAAGCAATCTCGTTTATGG
TGTAGTGACCTGGGGCTGTACCTGGNCACCCAGCTGCTGAAACAAACAGC
TTGGATTTACTTTCAACTTTGTGAGTGTGTGTTGAAAAAAGAAACACTAG
GGATGGGGCTCCAAGTATTTACTGC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAA
AATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTG
AGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGA
CAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTT
GGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTC
CTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCT
GGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCA
CTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCC
AGATGCCCCTCAACACAGGAATGGATACAGAAAATGTGGTACATCTACAC
AATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAG
CCAAATGGATGGACCTGGAGGTCATCATCCTGAGTGAGGTAACACATTCA
CAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAA
AATCTATGATACCCAAGATATAAGATAAAATTTCCTAAACACATGAAACT
CCAGAAAAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTAAAAGTG
GGAACA

Query= MSMg01no411_a23.b1 MSMg01no411_a23.b1 CHROMAT_FILE:
MSMg01no411_a23.b1 PHD_FILE: MSMg01no411_a23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:59 2005
         (601 letters)



>mm_chr7_77893487_77894487
          Length = 1001

 Score = 1108 bits (573), Expect = 0.0
 Identities = 594/607 (97%), Gaps = 11/607 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttggttgtgtcagcaccctccatgcagacaaagagagggacaaaaaatatgcaa 64
           ||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 196 gaattcttggttgagttagcaccctccatgcagacaaagagagggacaaaaa-tatgcaa 254

                                                                       
Query: 65  atttctagtaaaaaaacaaattcacacttttcttaaagcagaaagccttcctatgattta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 atttctagtaaaaaaacaaattcacacttttcttaaagcagaaagccttcctatgattta 314

                                                                       
Query: 125 aaccaagcagtctgcctgagtaatggtcttatatgtaagtggaaatcctttttgatattt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aaccaagcagtctgcctgagtaatggtcttatatgtaagtggaaatcctttttgatattt 374

                                                                       
Query: 185 acactactgatttctttaatctccactttggaattaacagacaataacaccacattgctc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 acactactgatttctttaatctccactttggaattaacagacaataacaccacattgctc 434

                                                                       
Query: 245 cct----------ggtacttgtgcatatttacccaagtgtctacagtgaggattgtacac 294
           |||          |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cctcagccgccctggtacttgtgcatatttacccaagtgtctacagtgaggattgtacac 494

                                                                       
Query: 295 agatctctaatccacctgcccgtgttacttaaaagcccagataaaatcagcaacccttag 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 agatctctaatccacctgcccgtgttacttaaaagcccagataaaatcagcaacccttag 554

                                                                       
Query: 355 atcttaaccttttaagtctgaaatgtttttaaagtctggccatggcaaccgaagctgggg 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 atcttaaccttttaagtctgaaatgtttttaaagtctggccatggcaaccgaagctgggg 614

                                                                       
Query: 415 gtggaggggggaatgcacattgggaaggagtagaagaccagggagacatgaaactgtagg 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gtggaggggggaatgcacattgggaaggagtagaagaccagggagacatgaaactgtagg 674

                                                                       
Query: 475 aggattgctacatcagaaagctctcagcttgaaccaccgttgcattaaataaatcaaaaa 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aggattgctacatcagaaagctctcagcttgaaccaccgttgcattaaataaatcaaaaa 734

                                                                       
Query: 535 ctgttataataatggtgactgtgtccataagtgggagggtaacctcggcagacagaagca 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ctgttataataatggtgactgtgtccataagtgggagggtaacctcggcagacagaagca 794

                  
Query: 595 atctcgt 601
           |||||||
Sbjct: 795 atctcgt 801


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space:   585681
Effective search space used:   585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)