XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTT
CCCATTCTCGCTTCTTTCATTTCCTGCCTTCTATGAGCTCTGACCTTGGG
TCACCCCTCCTCTCATGGGTGGAGTGCTTTTGTGAGAGACCCAATGGACA
GAAGCACTACACACTGGGGATTTGATGTAGGACTTCAGGCTGGACTGCCT
GGACTCTTCATCAAATTCCACCTGCAGAATTTTCTCTCTGCTGCAGAAAA
CCCAAAGGTGAGATAATTTGGTGATTTGATTCTTAGGCGATTCAGTGATA
TGAGGAGGCTGTATATTTTTTGTGGCTTCTAACTTCCCGCCTCCATCTCT
TTGATCATTAGATTTGTTCTTAATCTCACACACAGACATTCTGTGGTTTT
ATTTTTTTTCCTTTTTGGCAGGTTAATTAAACCTGTCTTTAATTTTTTTC
CTTCCTTTTCCAATTCCGTGTGAGCGCTGGGGGAAAGATCTGAGTCTCTA
ATCTCTGGAAGCATTTGTCATGGAACATTCCAGACATTCTAAAGCATAAA
CTATTCTGTCTTTGAGCCTGAGCTCGCTGGAAGTGCTCATTCACCACGCC
GTAGCTCCTACTTCCATTGTTTTTATCACCTTCACCCTGTATGGCACAAT
ATTTTCCTTTATCACGAAAAATCTACCACAACAAATCCCCCGTTATTTCG
CCCCTTTATTACTTCTAAGTAACTGCATATTTACGCCAC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCTATTTAGGTTCCCAGGCCTTTCTCTAATGG
ATCATTTGGTTTTTAACCTTTTTTTTCACTTGTTTATATGTTCTGGATAT
TAATCCTCTGTCAGATGTATATATCTGGCAAAGATTGTCTCCCACTCTGA
GCTTCCCCTTTCCTTCATTGGTTGCTTCTGTAGTTGAGCAGAAGCTTCTT
GGTTTTGAAGTCCCACTTGTAGATTGTTGGCTTTAATCCTGGGCAATTGG
TGTCCTATTAAGAAATTCTCTTTTCTCCACCTATGCCATGTAGGGCATTG
CCTCTGTTTTCTTCTAGCCATTTCAGATTTAGGCTTTTGATCTCCTTTGA
GTTAATTTTGGTGAAAGGTGATAGCTATTGGTCTGATTTCATTCTTTCCC
ACATAGACTCCAGTTTCCCAGAACTATTTGTTGAAGATGCTTTCTTTTCT
CTAGCATTTGCTTTATTTCTTTTTAAAATATTACATGTGGCTCATGCTTG
GTTTTAATTTTGCTCCGTTGGAATACATGTCCATTTTTGCGCTCGAACCT
TAACGGTTTTATTACTATGAATCTGCCACATAACTTATGAACTGGATATG
CTATACTTCCCATACCTGTCTTTTTCGTTTAAGAATCTTTTTCTCAATGG
GGCCGTTTTCGCATCTCCCATTTAATCTCGTTCATTATTTTTTTTT

Query= MSMg01no413_o06.b1 MSMg01no413_o06.b1 CHROMAT_FILE:
MSMg01no413_o06.b1 PHD_FILE: MSMg01no413_o06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:43 2005
         (435 letters)



>mm_chr7_131991225_131992060
          Length = 836

 Score =  760 bits (393), Expect = 0.0
 Identities = 423/437 (96%), Gaps = 9/437 (2%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcttcccattctcgcttctttcatttcctgccttctatgagctctgaccttgggt 63
           ||||||||| |||  || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ggaattctttccacccttgcttctttcatttcctgccttctatgagctctgaccttgggt 577

                                                                       
Query: 64  cacccctcctctcatgggtggagtgcttttgtgagagacccaatggacagaagcactaca 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cacccctcctctcatgggtggagtgcttttgtgagagacccaatggacagaagcactaca 517

                                                                       
Query: 124 cactggggatttgatgtaggacttcaggctggactgcctggactcttcatcaaattccac 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cactggggatttgatgtaggacttcaggctggactgcctggactcttcatcaaattccac 457

                                                                       
Query: 184 ctgcagaattttctctctgctgcagaaaacccaaaggtgagataatttggtgatttgatt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ctgcagaattttctctctgctgcagaaaacccaaaggtgagataatttggtgatttgatt 397

                                                                       
Query: 244 cttaggcgattcagtgatatgaggaggctgtatat----tttttgtggcttctaacttcc 299
           |||||||||||||||||||||||||||||| ||||    |    ||||||||||||||||
Sbjct: 396 cttaggcgattcagtgatatgaggaggctggatatgaaat----gtggcttctaacttcc 341

                                                                       
Query: 300 cgcctccatctctttgatcattagatttgttcttaatctcacacacagacattctgtggt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cgcctccatctctttgatcattagatttgttcttaatctcacacacagacattctgtggt 281

                                                                       
Query: 360 tttattttttttcctttttggcaggttaattaaacctgtctttaattttttt-ccttcct 418
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 280 tttattttttttcctttttggcaggttaattaaacctgtctttaattttttttccttcct 221

                            
Query: 419 tttccaattccgtgtga 435
           |||||||||||||||||
Sbjct: 220 tttccaattccgtgtga 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 836
Length adjustment: 9
Effective length of query: 426
Effective length of database: 827
Effective search space:   352302
Effective search space used:   352302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)