Query= MSMg01no414_a09.b1 MSMg01no414_a09.b1 CHROMAT_FILE:
MSMg01no414_a09.b1 PHD_FILE: MSMg01no414_a09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:54 2005
(150 letters)
>mm_chr7_128298936_128299486
Length = 551
Score = 223 bits (115), Expect = 6e-63
Identities = 136/143 (95%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 4 ggaattctctggccttc-cgcagtgcacaaaagacaaagaatctcagcacctagacagga 62
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggaattctctggccatcaagcagtgcacaaaagacaaagaatctcagcacctagacagga 261
Query: 63 ttcagcaaatcccactgcatacttcagcccagaaagagacaaagattgggaagtggagga 122
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 260 cccagcaaatcccacggcatacttcagcccagaaagagacaaagattggaaagtggagga 201
Query: 123 tggatggatggatggatggatgg 145
|||||||||||||||||||||||
Sbjct: 200 tggatggatggatggatggatgg 178
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 150
Length of database: 551
Length adjustment: 8
Effective length of query: 142
Effective length of database: 543
Effective search space: 77106
Effective search space used: 77106
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no414_a09.g1 MSMg01no414_a09.g1 CHROMAT_FILE:
MSMg01no414_a09.g1 PHD_FILE: MSMg01no414_a09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:54 2005
(462 letters)
>mm_chr7_128137393_128138256
Length = 864
Score = 785 bits (406), Expect = 0.0
Identities = 449/464 (96%), Gaps = 2/464 (0%)
Strand = Plus / Plus
Query: 1 gatgtaaggtctctgatttccaaagcttgcacttcgcagtctgtcccagattccttgcgt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 gatgtaaggtctctgatttccaaagcttgcacttcgcactctgtcccagattccttgcgt 260
Query: 61 tactgactgtcctgcatgtgcctgtgttagagactcagaccaggcaacttcacctcagta 120
||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||
Sbjct: 261 tactgactgtcctgcatgtgcctgtgttagagattcagacgaggcagcttcacctcagta 320
Query: 121 agtggatgcgagggacttgctaagacaccgcacacgcgagcatcctgggtctcgctgggg 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtggatgcaagggacttgctaagacaccgcacacgcgagcatcctgggtctcgctgggg 380
Query: 181 ctggtttccttccctcgaagagaagcttcggatcttgtcagtcactgagctgctattttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggtttccttccctcgaagagaagcttcggatcttgtcagtcactgagctgctattttc 440
Query: 241 agcctctatatatttttctctcgtttgttccttgaaagtagaagaggaagccaaagagtg 300
|||||||| | | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcctctagaaaatgagctctcgtttgttccttgaaagtagaagaggaagccaaagagtg 500
Query: 301 ggccaggaaggaaaggatgtttacagtcaacttacagtgttcaaaaattcctcttctatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggccaggaaggaaaggatgtttacagtcaacttacagtgttcaaaaattcctcttctatt 560
Query: 361 gtatgtacatacatttggttagaggaaacttctctgggctaaacaatgcacttttcatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtatgtacatacatttggttagaggaaacttctctgggctaaacaatgcacttttcatgt 620
Query: 421 tgcaaaca--gagtgctttcagaactttgtgaacgcgcatgagt 462
|||||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 621 tgcaaacaaagagtgttttcagaactttgtgaatgcgcatgagt 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 864
Length adjustment: 10
Effective length of query: 452
Effective length of database: 854
Effective search space: 386008
Effective search space used: 386008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
