Query= MSMg01no415_n06.b1 MSMg01no415_n06.b1 CHROMAT_FILE:
MSMg01no415_n06.b1 PHD_FILE: MSMg01no415_n06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:19 2005
(347 letters)
>mm_chr7_70788839_70789585
Length = 747
Score = 563 bits (291), Expect = e-165
Identities = 333/347 (95%), Gaps = 2/347 (0%)
Strand = Plus / Plus
Query: 1 ttggagatcttttaagcgccaccctgagtcccttacacactgtagatattgctcaacaac 60
|||||| |||||||||||||||||||||||| ||| ||||||| ||||||||||||||||
Sbjct: 201 ttggaggtcttttaagcgccaccctgagtcctttatacactgtggatattgctcaacaac 260
Query: 61 ttcagcacctgtcccatgcctgtctacaggatggtgatttgagaagcaatattgccattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcagcacctgtcccatgcctgtctacaggatggtgatttgagaagcaatattgccattt 320
Query: 121 ttagaatatcagctctgctaatccatgaacatgcaaggtttttccagtgtctggtatgtc 180
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 321 ttagaatatcagctctgctaatccatgagcatggaaggtttttccagtgtctggtatgtc 380
Query: 181 attctgtttattatttttcaaagtcttaaagttgtcattgtagagattttttttcacctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 attctgtttattatttttcaaagtcttaaagttgtcattgtagagattttttt-cacctc 439
Query: 241 cttggttattatttattccttggaatttttgaagctcatatgaaggatatgtttttcctg 300
|||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 440 cttggttag-agttattccttggaatttttgaagctcatatgaaggagatgtttttcccg 498
Query: 301 atttctgtgttggcaatttgttgctgctgattggaaaaactactttt 347
|||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 499 atttctgtgttggcaatttgttgctgctgattagaaaagctactttt 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_n06.g1 MSMg01no415_n06.g1 CHROMAT_FILE:
MSMg01no415_n06.g1 PHD_FILE: MSMg01no415_n06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:19 2005
(440 letters)
>mm_chr7_70966585_70967424
Length = 840
Score = 735 bits (380), Expect = 0.0
Identities = 425/442 (96%), Gaps = 6/442 (1%)
Strand = Plus / Minus
Query: 1 aattaccagcaaatgcctttccttctgtagtggactttaccctcaaatggtgaacccaaa 60
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 746 aattaccagcaaatgcctttcctcctgtagtggactttaccctcaaacggtgaaccaaaa 687
Query: 61 caaaccttccctcccttaagttggttttgccaggtgctctgtcaaagtctttggcagtgg 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 caaacctttcctcccttaagttggttttgccaggtgctctgtcaaagtctttggcagtgg 627
Query: 121 tcagatcctgccaatggggcctcatggaaggtgagacttagggcctttcttctcctcatg 180
|||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||
Sbjct: 626 tcagatcctgccaatggggcctcatgaaaggtaagacttagggcctttcctctcctcatg 567
Query: 181 agggcggggcaataaggaagtcatctgcaacctcacaggattttgactggtctcagactt 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 566 agggcggggcaataaggaagtcatctgcaacctcacaggattttgactgatctcagactt 507
Query: 241 ata--tttttccatgctgtgaatgggaagtgactaagcttgaggctacccacttctgtgg 298
| | || ||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 506 agagctt---ccatgctgtaaatgggaagtgactaagcttgaggttacccacttctgtgg 450
Query: 299 cctaaactgtcccctttgacccttaaaaggaagaaaaatgttccatccatagtaggaagg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cctaaactgtcccctttgacccttaaaaggaagaaaaatgttccatccatagtaggaagg 390
Query: 359 aatgaagagcatttgttcatggaatggattttacagtgcaacaaaaatgagttctcagct 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aatgaagagcatttgttcatggaatggattttacagtgcaacaaaaatgagttctcagct 330
Query: 419 gcattgggggggg-tatgtggt 439
||||||||||||| ||||||||
Sbjct: 329 gcattgggggggggtatgtggt 308
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
