Query= MSMg01no415_p14.b1 MSMg01no415_p14.b1 CHROMAT_FILE:
MSMg01no415_p14.b1 PHD_FILE: MSMg01no415_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:30 2005
(271 letters)
>mm_chr7_107548497_107549166
Length = 670
Score = 478 bits (247), Expect = e-139
Identities = 262/267 (98%), Gaps = 1/267 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttctattccgttctgcttattccaactttttttttttttgtcaagcctaatg 63
||||||||||| | | ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 204 ggaattctttccaggcagttctgcttattccaactttttttttttt-gtcaagcctaatg 262
Query: 64 atctgttgctggtttagcatcttctagacactgtacataagaagcctagtcgctttccat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atctgttgctggtttagcatcttctagacactgtacataagaagcctagtcgctttccat 322
Query: 124 aagtagtctgtcctgaaggttgctgtcatgttcctcgtataagtccagtttttgttacta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aagtagtctgtcctgaaggttgctgtcatgttcctcgtataagtccagtttttgttacta 382
Query: 184 taacagaatacctaaggtaggctaactttataaaaagagaggtttgtgtagctcagtgta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 taacagaatacctaaggtaggctaactttataaaaagagaggtttgtgtagctcagtgta 442
Query: 244 aactctggtaaggaccacagtggctgc 270
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Sbjct: 443 aactctggtaaggaccacagtggctgc 469
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 670
Length adjustment: 9
Effective length of query: 262
Effective length of database: 661
Effective search space: 173182
Effective search space used: 173182
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no415_p14.g1 MSMg01no415_p14.g1 CHROMAT_FILE:
MSMg01no415_p14.g1 PHD_FILE: MSMg01no415_p14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:30 2005
(244 letters)
>mm_chr7_107716344_107716987
Length = 644
Score = 424 bits (219), Expect = e-123
Identities = 231/235 (98%)
Strand = Plus / Minus
Query: 8 cagatgagagacttaggcaagcatttgcagcccttgcaacgtggactgtatcatcatctc 67
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 442 cagatgagagacttaggcaagcattttcagcccttgcaacttggactgtatcatcatctc 383
Query: 68 aaagatcagtttcctttctgctttttgaagtcactgatagatgattgtctatgtacttaa 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aaagatcagtttcctttctgctttttgaagtcactgatagatgattgtctatgtacttaa 323
Query: 128 acatggtgattgacatctgggattttaatttatacataatgttttgttttgcagtgtaga 187
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 acatggtgattgacatctgggattttaatttatacataatgttttgttttgcagtgtagg 263
Query: 188 caggtatgagagagcactaactctgtagctgaattcttgattagtgtgtttaggg 242
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 262 caggtatgagagagcactaactctgtagctgaattcttgattggtgtgtttaggg 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
