Query= MSMg01no415_p17.b1 MSMg01no415_p17.b1 CHROMAT_FILE:
MSMg01no415_p17.b1 PHD_FILE: MSMg01no415_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:30 2005
(449 letters)
>mm_chr7_107488646_107489494
Length = 849
Score = 822 bits (425), Expect = 0.0
Identities = 443/449 (98%)
Strand = Plus / Plus
Query: 1 tcaggtttgggtagagtttgcttcaaggcatttctgcccagaggaagtaaacaggcacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaggtttgggtagagtttgcttcaaggcatttctgcccagaggaagtaaacaggcacac 260
Query: 61 agactgcacaagacctgccattggctaaagcactcaaaatgggcactgaccacagcagga 120
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agactacacaagacctgccattggctaaagcactcaaaatgggcactgaccacagcaggg 320
Query: 121 ttccttgaatgacactaagatgtcgtttccagaaattcaggatcttaccaacaagactgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttccttgaatgacactaagatgtcgtttccagaaattcaggatcttaccaacaagactgc 380
Query: 181 agactgaatctgccacacagtccctgtcagagcaagcaccccaccatgccactaggattt 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 agactgaatctgccacacagtccctgtcacagcaagcaccccaccatgccactaggattt 440
Query: 241 catctaactcctgcactcctgcctgctctaagggacgatggtttctcaagtaacattcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catctaactcctgcactcctgcctgctctaagggacgatggtttctcaagtaacattcat 500
Query: 301 ctgtggccacacaaaggactcgtgtaactccacaggaaagatcacttaggttaagtaact 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtggccacacaaaggactcgtgtaactccacaggaaagatcacttaggttaagtaacg 560
Query: 361 ttagctcagcctttgaatttattttttactctagttctgccagaactttctacttgcaca 420
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 ttagctcagcctttgaatttattttttactctagttctgccagaattttctacttgcaca 620
Query: 421 tcctagctgactgagtttggctcagtgac 449
|||||||| ||||||||||||||||||||
Sbjct: 621 tcctagctaactgagtttggctcagtgac 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_p17.g1 MSMg01no415_p17.g1 CHROMAT_FILE:
MSMg01no415_p17.g1 PHD_FILE: MSMg01no415_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:30 2005
(477 letters)
>mm_chr7_107623001_107623873
Length = 873
Score = 804 bits (416), Expect = 0.0
Identities = 453/468 (96%), Gaps = 8/468 (1%)
Strand = Plus / Minus
Query: 1 ttgggctcagagaggctaggctctgtgcgggtggctgtagccaggccttggctcccccag 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 643 ttgggctcagagaggctaggctctgtgagggtggctgtagccaggccttggctcccccag 584
Query: 61 gctcttccttcagcctgtcttctagtctgcctgagttgtacagtgagacaagcctgagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gctcttccttcagcctgtcttctagtctgcctgagttgtacagtgagacaagcctgagga 524
Query: 121 ggcccagagcctttacagccaacttggctgaggaagagcggggtaggcatgtttagagac 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 523 ggcccagagcctttacagccaacttggctgaggaagagcagggtaggcatgtttagagac 464
Query: 181 atgctctccatttgctcaggcctcgttcccctttgccctacagaagagcagcaaggcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 atgctctccatttgctcaggcctcgttcccctttgccctacagaagagcagcaaggcttg 404
Query: 241 gctccttcccagcagggaggcactggcttccctgcccaggcctggaatgcactgtggggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gctccttcccagcagggaggcactggcttccctgcccaggcctggaatgcactgtggggg 344
Query: 301 cagctgactctcctcatggtatcctggtggcctttcttctcccaagccttgaatttgtcc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 343 cagctgactctcctcatggtatcctggtggcctttcttctcccaagccttgaatctg-cc 285
Query: 361 c-ggagagcaggcttcagggtaacttgacagcctgaatctaaggcttacccagatctgga 419
| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ctggagagcaggcttctg----acttgacagcctgaatctaaggcttacccagatctgga 229
Query: 420 gaggcccttggggtaagttcttttttttgctgctgttttttgtttttt 467
|||||||||||||||||||||||||||| || |||| || |||||||
Sbjct: 228 gaggcccttggggtaagttctttttttt--tgttgttgttggtttttt 183
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 873
Length adjustment: 10
Effective length of query: 467
Effective length of database: 863
Effective search space: 403021
Effective search space used: 403021
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
