Query= MSMg01no417_c08.b1 MSMg01no417_c08.b1 CHROMAT_FILE:
MSMg01no417_c08.b1 PHD_FILE: MSMg01no417_c08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:56 2005
(177 letters)
>mm_chr7_131750031_131750602
Length = 572
Score = 304 bits (157), Expect = 2e-87
Identities = 170/177 (96%), Gaps = 5/177 (2%)
Strand = Plus / Minus
Query: 1 gaaggttttatcctctgtagaatgaactttgtatagtagcattttatataggaccaacag 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 372 gaaggttttatcctctgtagaatgaactttgtatagtagcattttaaataggaccaacag 313
Query: 61 gctctcccacagtgagaatcttctacagggtctccaggggccctcccatagattcaaatg 120
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gctctcccacag-----ctcttctacagggtctccaggggccctcccatagattcaaatg 258
Query: 121 cccttggtagaaccaaggaaagaggtacagaggttagttagaggtggtagagtctct 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cccttggtagaaccaaggaaagaggtacagaggttagttagaggtggtagagtctct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 177
Length of database: 572
Length adjustment: 8
Effective length of query: 169
Effective length of database: 564
Effective search space: 95316
Effective search space used: 95316
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no417_c08.g1 MSMg01no417_c08.g1 CHROMAT_FILE:
MSMg01no417_c08.g1 PHD_FILE: MSMg01no417_c08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:56 2005
(105 letters)
>mm_chr7_131578207_131578713
Length = 507
Score = 188 bits (97), Expect = 1e-52
Identities = 104/107 (97%), Gaps = 2/107 (1%)
Strand = Plus / Plus
Query: 1 aattcactgtttttaatagctgagttatgattcttttaaagaggacacaaagatgggtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 aattcactgtttttaatagctgagttatgattcttttaaagaggacacaaagatgagtgg 260
Query: 61 gtccagaaggggatatctggaatgagtaggaggag--ggtggatatg 105
||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 gtccagaaggggatatctggaatgagtaggaggagtgggtggatatg 307
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 105
Length of database: 507
Length adjustment: 8
Effective length of query: 97
Effective length of database: 499
Effective search space: 48403
Effective search space used: 48403
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
