Query= MSMg01no417_d05.b1 MSMg01no417_d05.b1 CHROMAT_FILE:
MSMg01no417_d05.b1 PHD_FILE: MSMg01no417_d05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:01 2005
(456 letters)
>mm_chr7_107127325_107128179
Length = 855
Score = 758 bits (392), Expect = 0.0
Identities = 408/414 (98%), Gaps = 3/414 (0%)
Strand = Plus / Plus
Query: 22 ggctagcaaatggcttttcctgattcacggttcttgaaaatctcagctgtaggtatgttg 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ggctagcaaatggcttttcctgattcacggttcttgaaaatctcagctgtaggtatgttg 281
Query: 82 cctaggcttgcaccaaagaagcctaggtctcggttcatgttacaaacggaattttctatc 141
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cttaggcttgcaccaaagaagcctaggtctcggttcatgttacaaacggaattttctatc 341
Query: 142 tcagacttcagcaccaacaagtgatgggctgccgacggtgagaaaggcaaaggagttcag 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tcagacttcagcaccaacaagtgatgggctgccgacggtgagaaaggcaaaggagttcag 401
Query: 202 gccaagagtcctacaacagacctttaagttgccagcatcatagatgaaacttacatagaa 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gccaagagtcctacaacagacctttaagttgccagcatcatagatgaaacttacatagaa 461
Query: 262 agacagaaaacagcctctcagccaaaccaatctttgtctccaaaacttaaatcccaccca 321
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 agacagaaaacagcccc-cagccaaaccaatctttgtctccaaaacttaaatcccaccca 520
Query: 322 gctttcttcatcaagcaccactaacgtttatgattagtattatcaccaatatagatggca 381
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 521 gctttcttcatcaagcaccactaacgtttatgattagtattatcaccaaaatagatggca 580
Query: 382 tttatctcatcctgtgtggcaagctctgcgctaagcat--atatatatatatat 433
|||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 581 tttatctcatcctgtgtggcaagctctgcgctaagcatgcatatatatatatat 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 855
Length adjustment: 10
Effective length of query: 446
Effective length of database: 845
Effective search space: 376870
Effective search space used: 376870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_d05.g1 MSMg01no417_d05.g1 CHROMAT_FILE:
MSMg01no417_d05.g1 PHD_FILE: MSMg01no417_d05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:01 2005
(350 letters)
>mm_chr7_107293014_107293763
Length = 750
Score = 646 bits (334), Expect = 0.0
Identities = 346/350 (98%)
Strand = Plus / Minus
Query: 1 atccacataactaaagcatggttctcctctgtaccaggaataaaatacaaagacttagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 atccacataactaaagcatggttctcctctgtaccaggaataaaatacaaagacttagac 491
Query: 61 acctaggtactcggatggcaaagtgtattacgaaatgagctgggcaaaggtagaagccag 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 490 acctaggtactcggatggcaaagtgtattatgaaatgagctgggcaaaggtagaagccag 431
Query: 121 gcagcaaagcctaatcactgtgctgtggaaccgactagaaaccaagtagatcatattgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gcagcaaagcctaatcactgtgctgtggaaccgactagaaaccaagtagatcatattgag 371
Query: 181 ttccactgtctattgaccccagtgccacagaggtggctgtttacctcttggtgtttggag 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 370 ttccactgtctattgaccccagtgccacagaggtggctgttttcctcttggtgtttggag 311
Query: 241 tgagaatgtctcctggaggcttgggcatttaaacagttgattcctggctcgtggtgctgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgagaatgtctcctggaggcttgggcatttaaacagttgattcctggctcgtggtgctgt 251
Query: 301 tcgtgggaggcttaggtgatgtgtgttttctggaagaagtgtttcactgc 350
||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tcgggggaggtttaggtgatgtgtgttttctggaagaagtgtttcactgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
