Query= MSMg01no417_p05.b1 MSMg01no417_p05.b1 CHROMAT_FILE:
MSMg01no417_p05.b1 PHD_FILE: MSMg01no417_p05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:00 2005
(503 letters)
>mm_chr7_112376487_112377387
Length = 901
Score = 946 bits (489), Expect = 0.0
Identities = 499/503 (99%), Gaps = 2/503 (0%)
Strand = Plus / Plus
Query: 1 catctcctgagtgctggtgttgcagctggtgcctccacagcaggccttatttgtgcattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catctcctgagtgctggtgttgcagctggtgcctccacagcaggccttatttgtgcattg 260
Query: 61 tgttatcagtatcacagcagctttcctgaaggataattcctggaaatgctcctgacactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttatcagtatcacagcagctttcctgaaggataattcctggaaatgctcctgacactt 320
Query: 121 ctgaatagatgcaggatggccatatctccctacaacatctctttaacctgacagctcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgaatagatgcaggatggccatatctccctacaacatctctttaacctgacagctcatt 380
Query: 181 tccacagaaaacacactaagaaccctgtagtggtgtccactagagatgtgctcactgctg 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 tccacagaaaacacactaagaaccctgtagtggtgtccactagagatatgctcactgctg 440
Query: 241 tttttggaatcttaaagtaaaattgttaatggtgctatctgaggcagaatggaaaacagg 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 tttttggaatcttaaagtaaaattgttaatggtgctatctgaggcaggatggaaaacagg 500
Query: 301 ggcgataatagagagagggtagaaccccttactctggggaacctctcaacagcttaaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggcgataatagagagagggtagaaccccttactctggggaacctctcaacagcttaaaac 560
Query: 361 attttcagcacaattcacacttgtgaatactgtgaatgttgagcacactggggtatttat 420
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attttcagcacaattcacac--gtgaatactgtgaatgttgagcacactggggtatttat 618
Query: 421 tttaagagtattggggctggagagatggctcagtggttgagaacactgtctgctcttcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tttaagagtattggggctggagagatggctcagtggttgagaacactgtctgctcttcca 678
Query: 481 aaggtcatgagttcaattcccag 503
|||||||||||||||||||||||
Sbjct: 679 aaggtcatgagttcaattcccag 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 901
Length adjustment: 10
Effective length of query: 493
Effective length of database: 891
Effective search space: 439263
Effective search space used: 439263
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_p05.g1 MSMg01no417_p05.g1 CHROMAT_FILE:
MSMg01no417_p05.g1 PHD_FILE: MSMg01no417_p05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:00 2005
(501 letters)
>mm_chr7_112577659_112578558
Length = 900
Score = 930 bits (481), Expect = 0.0
Identities = 496/501 (99%), Gaps = 1/501 (0%)
Strand = Plus / Minus
Query: 1 atgccacatttaagattaaagaacacccgagtaactgtgatgacatcagaataagcaaag 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 atgccacatttaagtttaaagaacacccgagtaactgtgatgacatcagaataagcaaag 641
Query: 61 acaatagccaagactaaataacatctctgcaggtgacatcttcaggaagcatggcttata 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 acaatagccaagaataaataacatctctgcaggtgacatcttcaggaagcatggcttata 581
Query: 121 tgcagagctctgtatgtgaacaggagaataatcaagtgatggtagttctgatttgacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tgcagagctctgtatgtgaacaggagaataatcaagtgatggtagttctgatttgacaga 521
Query: 181 ggaggtggtagtaataccaatgatgtgtgggcactatttaagtgagtataaatgtcagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ggaggtggtagtaataccaatgatgtgtgggcactatttaagtgagtataaatgtcagat 461
Query: 241 gttaacactatttagctcagttaagatgttaatcttgattgtgtgaaatagctgagaact 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gttaacac-atttagctcagttaagatgttaatcttgattgtgtgaaatagctgagaact 402
Query: 301 caagtgaacatatagtctttgctgaaaatatctgagtgcttaagaatgatactccatgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 caagtgaacatatagtctttgctgaaaatatctgagtgcttaagaatgatactccatgca 342
Query: 361 tgattttctgggtaagatctggagaaggtttacttaagcagtcatgggaaagatgtgata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 341 tgattttctgggtaagatctggagaaggtttacttaagcagtcatgggaaagatgtggta 282
Query: 421 ttttgtgggtaataataaaataagggtagcatgtcacatacacataacttctaagtgact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ttttgtgggtaataataaaataagggtagcatgtcacatacacataacttctaagtgact 222
Query: 481 gcggatgatactgatgttgag 501
| |||||||||||||||||||
Sbjct: 221 gtggatgatactgatgttgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 900
Length adjustment: 10
Effective length of query: 491
Effective length of database: 890
Effective search space: 436990
Effective search space used: 436990
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
