Query= MSMg01no418_n14.b1 MSMg01no418_n14.b1 CHROMAT_FILE:
MSMg01no418_n14.b1 PHD_FILE: MSMg01no418_n14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:09 2005
(549 letters)
>mm_chr7_53844913_53845861
Length = 949
Score = 984 bits (509), Expect = 0.0
Identities = 536/545 (98%)
Strand = Plus / Plus
Query: 5 gaattccttcactatcctaactccagttcagagacatggtttctgatgcctgttcttcta 64
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 gaattccttcactaaactaactccagttcagagacatggcttctgatgcctgttcttcta 264
Query: 65 aaagccctagcctttctttaagaacaaacaaaagagctcagtgaagtaagattcagtgac 124
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 265 aaagccctagcctttctttaagaacaaacaaaagggctcagtgaagtaagattcagtgac 324
Query: 125 agaaacatacaccctggagaaattaagattcctgccttaaacggagaacttcaggccatt 184
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggaacatacaccctggagaaattaagattcctgccttaaacggagaacttcaggccatt 384
Query: 185 tcagagaaccaaagggacttgaataagcaagagggacacaatgttttcttcactggaaaa 244
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 385 tcagagaaccaaagggacttgaataagcaagtgggacacaatgttttcttcactggaaaa 444
Query: 245 tataaacagatgtgcagaatacttagctcagcactaaacaccttctaggttgggtcacag 304
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 tataaacagatgtgcagaatacttagctcagcactaaacaccttctaggtcgggtcacag 504
Query: 305 ccccccaccccatccccatgttatcacctcatgagggctccatgccccggccaatttaac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccccccaccccatccccatgttatcacctcatgagggctccatgccccggccaatttaac 564
Query: 365 tgttagcagcccccatgctttcctcacatctccacccagtatgactctgttcaagttgtt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgttagcagcccccatgctttcctcacatctccacccagtatgactctgttcaagttgtt 624
Query: 425 atgttccctgaagtcctcctgtgtcttccaaatgcttcagtcccatccatccctcacgat 484
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atgttccttgaagtcctcctgtgtcttccaaatgcttcagtcccatccatccctcacgac 684
Query: 485 atacctcaatgccatgccattctcaaaacccaagccaatctttccaccaactgagttcaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atacctcaatgccatgccattctcaaaacccaagccaatctttccaccaactgagttcaa 744
Query: 545 gctct 549
|||||
Sbjct: 745 gctct 749
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_n14.g1 MSMg01no418_n14.g1 CHROMAT_FILE:
MSMg01no418_n14.g1 PHD_FILE: MSMg01no418_n14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:09 2005
(318 letters)
>mm_chr7_54011594_54012310
Length = 717
Score = 584 bits (302), Expect = e-171
Identities = 314/318 (98%), Gaps = 1/318 (0%)
Strand = Plus / Minus
Query: 1 gcaggatggcttctcagagcaagtgcaaaccactggtcttgaggggagtacggcctcagg 60
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 444 gcaggatggcttctcagagcaagcgcaaaccactggtcttgaggggagtatggcctcagg 385
Query: 61 agattgtactactgaggggaagcgccatggtcagtttgctgaggcagagtcagaggacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agattgtactactgaggggaagcgccatggtcagtttgctgaggcagagtcagaggacaa 325
Query: 121 gtaacttctagattttttcatgaaggaaaggaaaccaaggatcaaacaaaggaagagctg 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtaacttctaga-tttttcatgaaggaaaggaaaccaaggatcaaacaaaggaagagctg 266
Query: 181 tgaggcagaatccagccttcgaagattttatacatatgagaaatattaaagtcagtgcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgaggcagaatccagccttcgaagattttatacatatgagaaatattaaagtcagtgcat 206
Query: 241 ttcaggggaagatttctcagtgggtagtgcttgtctgagcagcatggagttaggatcccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttcaggggaagatttctcagtgggtagtgcttgtctgagcagcatggagttaggatcccc 146
Query: 301 agaggccacagaaaagct 318
|||| |||||||||||||
Sbjct: 145 agagcccacagaaaagct 128
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 717
Length adjustment: 9
Effective length of query: 309
Effective length of database: 708
Effective search space: 218772
Effective search space used: 218772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
