Query= MSMg01no419_h17.b1 MSMg01no419_h17.b1 CHROMAT_FILE:
MSMg01no419_h17.b1 PHD_FILE: MSMg01no419_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:02 2005
(228 letters)
>mm_chr7_4483973_4484600
Length = 628
Score = 404 bits (209), Expect = e-117
Identities = 223/229 (97%), Gaps = 3/229 (1%)
Strand = Plus / Plus
Query: 1 cgggagatggctgcggtgtggtctgaaactggacaccggacgcggttgtcataacgacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgggagatggctgcggtgtggtctgaaactggacaccggacgcggttgtcataacgacag 260
Query: 61 ccggaccagagtagggtgcctgctttctggatccgtcctccaaatttctaggaaagggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccggaccagagtagggtgcctgctttctggatccgtcctccaaatttctaggaaagggag 320
Query: 121 gatctaccttgctgcttcaaattaaatcagaactgaacgaaatgtctttcctgtttgtct 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 gatctaccttgctgcttcaaattaaatcagaactgaacgaaatgtcttccctgtttgtct 380
Query: 181 ttcttttctttctctctct---ctctctctctctctctctctctctctc 226
||||||||||| ||| ||| |||||||||||||||||||||||||||
Sbjct: 381 ttcttttctttttctttcttttctctctctctctctctctctctctctc 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 23
Number of HSP's successfully gapped: 1
Length of query: 228
Length of database: 628
Length adjustment: 9
Effective length of query: 219
Effective length of database: 619
Effective search space: 135561
Effective search space used: 135561
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no419_h17.g1 MSMg01no419_h17.g1 CHROMAT_FILE:
MSMg01no419_h17.g1 PHD_FILE: MSMg01no419_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:02 2005
(210 letters)
>mm_chr7_4667786_4668395
Length = 610
Score = 398 bits (206), Expect = e-116
Identities = 209/210 (99%)
Strand = Plus / Minus
Query: 1 cgggataacagctacaattcctttgaagggatgtcggtgtgaagtgtgactagacatgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 cgggataacagctacaattcctttgaagggatgtcggtgtgaagtgtgactagacatgcc 351
Query: 61 gggtgaggaaagcacctcataggaccaaagatgcattgatcccagcctgaagtgtcagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gggtgaggaaagcacctcataggaccaaagatgcattgatcccagcctgaagtgtcagag 291
Query: 121 catctgaggtgggctgccggggctttggcatgtgctgtgtgacccttgactctggcgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 290 catctgaggtgggctgccggggctttggcatgtgctgtgtgacccttgactgtggcgtga 231
Query: 181 agtgattgtcctgcacgccctacatatgcg 210
||||||||||||||||||||||||||||||
Sbjct: 230 agtgattgtcctgcacgccctacatatgcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
