Query= MSMg01no419_m14.b1 MSMg01no419_m14.b1 CHROMAT_FILE:
MSMg01no419_m14.b1 PHD_FILE: MSMg01no419_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:26 2005
(233 letters)
>mm_chr7_4976638_4977269
Length = 632
Score = 427 bits (221), Expect = e-124
Identities = 230/233 (98%), Gaps = 2/233 (0%)
Strand = Plus / Minus
Query: 1 gggttgccacaaggaaagtgcacactaatgaactagaatttattaggttcagaataatcc 60
||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 307 gggttgccacaaggaaagtgcacactaatgaac-agaatttattaggttcaggataatcc 249
Query: 61 caagtgggtaacaagacattttctcctttagtggactttaaaaaaaaaatgtatgtatga 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 248 caagtgggtaacaagacattttctcctttagtggacttt-aaaaaaaaatgtatgtatga 190
Query: 121 gtgcactgtagctgttttcagacacaccagaagaaggcattgtgtcccattacagatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gtgcactgtagctgttttcagacacaccagaagaaggcattgtgtcccattacagatggt 130
Query: 181 tgtgagccaccatgtgattgctgggacttgaactcaggacctctggaagagca 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tgtgagccaccatgtgattgctgggacttgaactcaggacctctggaagagca 77
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 632
Length adjustment: 9
Effective length of query: 224
Effective length of database: 623
Effective search space: 139552
Effective search space used: 139552
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no419_m14.g1 MSMg01no419_m14.g1 CHROMAT_FILE:
MSMg01no419_m14.g1 PHD_FILE: MSMg01no419_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:26 2005
(598 letters)
>mm_chr7_4921371_4922368
Length = 998
Score = 1149 bits (594), Expect = 0.0
Identities = 597/598 (99%)
Strand = Plus / Plus
Query: 1 tctcaggaacgttgttctcaggactgagtcccttcggaggagcttaagggccacagtttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcaggaacgttgttctcaggactgagtcccttcggaggagcttaagggccacagtttg 260
Query: 61 acctgtcgggaagatggtgtcagataagaacctgggacatcatggtcctgctatgggacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctgtcgggaagatggtgtcagataagaacctgggacatcatggtcctgctatgggacc 320
Query: 121 ttagggaagccacttgacctctctgagcctgagaattttcatgaaagtcaagtttctcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagggaagccacttgacctctctgagcctgagaattttcatgaaagtcaagtttctcca 380
Query: 181 tctgtgaagtgtggattgaaacagatctttccttatttgctctgctattctatattagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgtgaagtgtggattgaaacagatctttccttatttgctctgctattctatattagcc 440
Query: 241 tgctgtgctgtcttgtataactgacttaccctctctggtcttccatttcctataagataa 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctgtgctgccttgtataactgacttaccctctctggtcttccatttcctataagataa 500
Query: 301 agggacatgatagtgacatgaattccagttcaaattgttctcttgccttgctgtgtgatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agggacatgatagtgacatgaattccagttcaaattgttctcttgccttgctgtgtgatg 560
Query: 361 tgagacttggagtctgccataacctctctgggggacctatatctctcagaagatcacaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgagacttggagtctgccataacctctctgggggacctatatctctcagaagatcacaga 620
Query: 421 gttctacattttcagagttcccaccaggtctggcttatctctgagatgtctcatgctgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gttctacattttcagagttcccaccaggtctggcttatctctgagatgtctcatgctgag 680
Query: 481 agaatttgaagtccaccccttggtggctgaactcacctccttggcgtggctgggctagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaatttgaagtccaccccttggtggctgaactcacctccttggcgtggctgggctagga 740
Query: 541 gcacgcggccataggagccggaacctagctttcggatgagacggtactgtacacacag 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcacgcggccataggagccggaacctagctttcggatgagacggtactgtacacacag 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
