MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-420B09
Chromosome	7 (Build37)
Map Location	91,786,202 - 91,786,669
singlet/doublet	singlet
Overlap gene	Zfand6
Upstream gene	Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2, 9930013L23Rik, 2210412D01Rik, Arnt2, LOC100039239, Fah
Downstream gene	2610206C17Rik, EG620480, Olfr291, LOC666276, Olfr290, ENSMUSG00000070600, F830104D24Rik, LOC620641, EG620672, Vmn2r-ps68, EG620697, Vmn2r-ps69, LOC330581, LOC100039339, Vmn2r70, Vmn2r-ps72, EG233445
Link	Open Mouse BAC browser

Click to get alignment info.

name	Stard5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170460 MGI:2156765
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16170 MGI:1270855
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Phgdh-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83494 MGI:1933203
definition	gene_synonym : D7Ssb1 note : 3-phosphoglycerate dehydrogenase, pseudogene 1 pseudo : _no_value

name	LOC666170 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666170
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 865 ESTs, 12 Proteins pseudo : _no_value

name	1700026D08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75556 MGI:1922806
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mesdc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80889 MGI:1891420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mesdc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67943 MGI:1891421
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9930013L23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80982 MGI:2443629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2210412D01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70178 MGI:1917428
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arnt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11864 MGI:107188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039239 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Fah (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14085 MGI:95482
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfand6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65098 MGI:1929510
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2610206C17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72495 MGI:1919745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	EG620480 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620480 MGI:3643981
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 204 ESTs, 7 Proteins

name	Olfr291 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258410 MGI:3030125
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666276 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666276
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Olfr290 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258411 MGI:3030124
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	ENSMUSG00000070600 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100009609 MGI:3642776
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 21 Proteins

name	F830104D24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233437 MGI:3588220
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620641 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620641
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	EG620672 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620672 MGI:3643129
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins

name	Vmn2r-ps68 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG620697 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620697 MGI:3648297
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins

name	Vmn2r-ps69 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins pseudo : _no_value

name	LOC330581 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:330581
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 Proteins

name	LOC100039339 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	Vmn2r70 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670940
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins

name	Vmn2r-ps72 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666358
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG233445 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233445 MGI:3646472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 Proteins

name	Stard5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254328 GeneID:170460 MGI:2156765
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : StAR-related lipid transfer (START) domain containing 5 transcript_id : NM_023377.4

name	Il16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130040 GeneID:16170 MGI:1270855
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 16 transcript_id : NM_010551.3

name	1700026D08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351561 GeneID:75556 MGI:1922806
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700026D08 gene transcript_id : NM_029335.2

name	Mesdc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364039 GeneID:80889 MGI:1891420
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mesoderm development candidate 1 transcript_id : NM_030705.3

name	Mesdc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543246 GeneID:67943 MGI:1891421
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mesoderm development candiate 2 transcript_id : NM_023403.2

name	9930013L23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373414 GeneID:80982 MGI:2443629
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9930013L23 gene transcript_id : NM_030728.3

name	2210412D01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19526905 GeneID:70178 MGI:1917428
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2210412D01 gene transcript_id : NM_133722.1

name	Arnt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328094 GeneID:11864 MGI:107188
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aryl hydrocarbon receptor nuclear translocator 2 transcript_id : NM_007488.2

name	LOC100039239 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257543 GeneID:100039239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039239 transcript_id : XM_001472533.1

name	Fah (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227239 GeneID:14085 MGI:95482
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fumarylacetoacetate hydrolase transcript_id : NM_010176.2

name	Zfand6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371149 GeneID:65098 MGI:1929510
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, AN1-type domain 6 transcript_id : NM_022985.4

name	2610206C17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380802 GeneID:72495 MGI:1919745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : RIKEN cDNA 2610206C17 gene transcript_id : XM_895846.2

name	EG620480 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257541 GeneID:620480 MGI:3643981
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 204 ESTs, 7 Proteins product : predicted gene, EG620480 transcript_id : XM_884867.3

name	Olfr291 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33238959 GeneID:258410 MGI:3030125
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 291 transcript_id : NM_146415.1

name	Olfr290 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33238965 GeneID:258411 MGI:3030124
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 290 transcript_id : NM_146416.1

name	ENSMUSG00000070600 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257545 GeneID:100009609 MGI:3642776
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 21 Proteins product : predicted gene, ENSMUSG00000070600 transcript_id : XM_001472549.1

name	F830104D24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76443669 GeneID:233437 MGI:3588220
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA F830104D24 gene transcript_id : NM_001033878.1

name	EG620672 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257547 GeneID:620672 MGI:3643129
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins product : predicted gene, EG620672 transcript_id : XM_885064.2

name	EG620697 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257549 GeneID:620697 MGI:3648297
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins product : predicted gene, EG620697 transcript_id : XM_885089.3

name	LOC330581 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257551 GeneID:330581
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 Proteins product : similar to putative pheromone receptor transcript_id : XM_001472690.1

name	LOC100039339 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257553 GeneID:100039339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : similar to pol protein transcript_id : XM_001472716.1

name	Vmn2r70 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257555 GeneID:670940
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins product : vomeronasal receptor Vmn2r70 transcript_id : XM_001472739.1

name	EG233445 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257557 GeneID:233445 MGI:3646472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 Proteins product : predicted gene, EG233445 transcript_id : XM_885248.3

name	Stard5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21218432 CCDS:CCDS21411.1 GeneID:170460 MGI:2156765
definition	GO_function : GO:0015485 - cholesterol binding [Evidence IEA] [Evidence ISS]; GO:0017127 - cholesterol transporter activity [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : 18B7-T7(GS); StAR-related protein 1-4E; StAR-related protein p3-15E/p3-16E product : StAR-related lipid transfer protein 5 protein_id : NP_075866.2

name	Il16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138550 CCDS:CCDS21412.1 GeneID:16170 MGI:1270855
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0005622 - intracellular [Evidence IDA] GO_function : GO:0005125 - cytokine activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0050930 - induction of positive chemotaxis [Evidence IDA]; GO:0030595 - leukocyte chemotaxis [Evidence IDA] codon_start : 1 product : interleukin 16 protein_id : NP_034681.2

name	1700026D08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312972 CCDS:CCDS21413.1 GeneID:75556 MGI:1922806
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC75556 protein_id : NP_083611.1

name	Mesdc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507648 CCDS:CCDS21414.1 GeneID:80889 MGI:1891420
definition	codon_start : 1 product : mesoderm development candidate 1 protein_id : NP_109630.1

name	Mesdc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543247 CCDS:CCDS21415.1 GeneID:67943 MGI:1891421
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0007498 - mesoderm development [Evidence NAS] codon_start : 1 exception : mismatches in translation product : mesoderm development candiate 2 protein_id : NP_075892.2

name	9930013L23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38638700 CCDS:CCDS21416.1 GeneID:80982 MGI:2443629
definition	codon_start : 1 exception : mismatches in translation note : transmembrane protein 2-like product : hypothetical protein, 12H19.01.T7 protein_id : NP_109653.2

name	2210412D01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526906 CCDS:CCDS21417.1 GeneID:70178 MGI:1917428
definition	codon_start : 1 product : hypothetical protein LOC70178 protein_id : NP_598483.1

name	Arnt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328095 GeneID:11864 MGI:107188
definition	GO_component : GO:0005634 - nucleus [Evidence NAS] [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0017162 - aryl hydrocarbon receptor binding [Evidence IPI]; GO:0005061 - aryl hydrocarbon receptor nuclear translocator activity [Evidence ISS]; GO:0003677 - DNA binding [Evidence IDA]; GO:0046982 - protein heterodimerization activity [Evidence ISS] [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence ISS]; GO:0000155 - two-component sensor activity [Evidence IEA] GO_process : GO:0007417 - central nervous system development [Evidence IMP]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IEP]; GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA] [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001666 - response to hypoxia [Evidence TAS]; GO:0009636 - response to toxin [Evidence TAS]; GO:0009410 - response to xenobiotic stimulus [Evidence TAS]; GO:0007165 - signal transduction [Evidence NAS] [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : aryl hydrocarbon receptor nuclear translocator 2 protein_id : NP_031514.2

name	LOC100039239 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257544 GeneID:100039239
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472583.1

name	Fah (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753814 CCDS:CCDS21418.1 GeneID:14085 MGI:95482
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0004334 - fumarylacetoacetase activity [Evidence IEA] [Evidence IMP]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006527 - arginine catabolism [Evidence IMP]; GO:0009072 - aromatic amino acid family metabolism [Evidence IEA]; GO:0006559 - L-phenylalanine catabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0006572 - tyrosine catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : fumarylacetoacetate hydrolase protein_id : NP_034306.1

name	Zfand6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15805026 CCDS:CCDS21419.1 GeneID:65098 MGI:1929510
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IPI] codon_start : 1 note : zinc finger, A20 domain containing 3 product : associated with Prkcl1 protein_id : NP_075361.2

name	2610206C17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82906994 GeneID:72495 MGI:1919745
definition	codon_start : 1 product : hypothetical protein LOC72495 protein_id : XP_900939.1

name	EG620480 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257542 GeneID:620480 MGI:3643981
definition	codon_start : 1 product : similar to isolog of yeast sui1 and rice gos2; putative protein_id : XP_889960.3

name	Olfr291 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33238960 CCDS:CCDS21420.1 GeneID:258410 MGI:3030125
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2NHDJ-11231385-11230438; olfactory receptor MOR254-2 product : olfactory receptor 291 protein_id : NP_666527.1

name	Olfr290 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33238966 CCDS:CCDS21421.1 GeneID:258411 MGI:3030124
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x6K02T2NHDJ-11170115-11169168; olfactory receptor MOR254-1 product : olfactory receptor 290 protein_id : NP_666528.1

name	ENSMUSG00000070600 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257546 GeneID:100009609 MGI:3642776
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_001472599.1

name	F830104D24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76443670 CCDS:CCDS21422.1 GeneID:233437 MGI:3588220
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008067 - metabotropic glutamate, GABA-B-like receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007216 - metabotropic glutamate receptor signaling pathway [Evidence IEA] codon_start : 1 exception : mismatches in translation note : putative pheromone receptor product : pheromone receptor-like protein_id : NP_001029050.1

name	EG620672 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257548 GeneID:620672 MGI:3643129
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_890157.2

name	EG620697 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257550 GeneID:620697 MGI:3648297
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_890182.2

name	LOC330581 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257552 GeneID:330581
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_001472740.1

name	LOC100039339 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257554 GeneID:100039339
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001472766.1

name	Vmn2r70 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257556 GeneID:670940
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_001472789.1

name	EG233445 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257558 GeneID:233445 MGI:3646472
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_890341.3

name	LOC666276 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666276
definition	number : 1 pseudo : _no_value

name	LOC666276 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666276
definition	number : 2 pseudo : _no_value

name	LOC666276 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666276
definition	number : 3 pseudo : _no_value

name	LOC620641 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620641
definition	number : 1 pseudo : _no_value

name	LOC620641 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620641
definition	number : 2 pseudo : _no_value

name	LOC620641 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620641
definition	number : 3 pseudo : _no_value

name	Vmn2r-ps68 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620683
definition	number : 1 pseudo : _no_value

name	Vmn2r-ps68 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620683
definition	number : 2 pseudo : _no_value

name	Vmn2r-ps69 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670926
definition	number : 1 pseudo : _no_value

name	Vmn2r-ps69 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670926
definition	number : 2 pseudo : _no_value

name	Vmn2r-ps69 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670926
definition	number : 3 pseudo : _no_value

name	Vmn2r-ps69 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670926
definition	number : 4 pseudo : _no_value

name	Vmn2r-ps69 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670926
definition	number : 5 pseudo : _no_value

name	Vmn2r-ps69 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670926
definition	number : 6 pseudo : _no_value

name	Vmn2r-ps72 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666358
definition	number : 1 pseudo : _no_value

name	LOC666170 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257540 GeneID:666170
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 865 ESTs, 12 Proteins product : similar to kappa-B motif-binding phosphoprotein - mouse pseudo : _no_value transcript_id : XR_030638.1

clone name	MSMg01-400A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147P13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-353J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122M22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-538C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384E10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-053O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505D06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-053A03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-519O09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-331N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337A20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-326H23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-048E21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-048G23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-384E10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-440O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536M08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-459O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211H21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-303B17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-482H12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-262L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503M05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-338M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329L03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-353E04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-366D06
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-004D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085L13
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-420B09.T7 (MSMg01no420_b09.b1)	MSMg01-420B09.TJ (MSMg01no420_b09.g1)
ACC	AG515034	AG515035
length	725	755
length of high quality (start - end)	211 (325 - 535)	494 (72 - 565)
definition	CHROMAT_FILE: MSMg01no420_b09.b1 PHD_FILE: MSMg01no420_b09.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:39:48 2005	CHROMAT_FILE: MSMg01no420_b09.g1 PHD_FILE: MSMg01no420_b09.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:39:48 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NTTAACAAAAATTGCGGCGCTGAAAGAGNACTAAAGTCACAAAAGAGCGG AANNCCANGGTTTTCTCACACGGGTNTAAAAAGAACTCATTTTCTTTCTT AAGAGAGACTGAGATCATCTTCCTATTGTCTGAGTATTTGACCTATATAT GACTGAGGGGCTATTTTTCAATCTGCCACAAGGAATATATGTGTTTACCG CGTCACTTTCTTGCGCATTTTAAATAAAGGTGCTAAGAGAGAAAAGAATT TTTAATTTAAACTGGAAAACAAACCCCGGAAAAATATCTAAAAAGGGTTT TTCTTTTTCAGGCTGTCCTTTTTCTTTTTTGATTGAATCTTTGAAAATAC AAACCATTTTCATTTTAATGAAGTACTTTTTAATTACTCCTTTTAATGTC ATATCTAAAACACCTTGCCTAGTGCAAAGAAATGAAGATTTCCTTAAAAA GTTTCATAGTTTAACTTATGCTTAAATTCTTGACCATGTTGGAGAAAATT TTGTCTATTCTATGAGGCAGGGGAATGGCTACATTCTTTGGTGTATATAT ACACATTTATAAATGTATGCGTGCCTATGTGTGTGTGCATGTGTGCGTGC CCGCGCGTGCGCACATGTGCGGTAAACGCTTTCTGGATTTGAAACTGTTT ATTTTATTAGAAAGTTGACCCCNAAACGGCCGGCCGCGAGGAACCCCGAA ATTAAATCCTGACAGCCCTGGTTTA	GCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXTCAGAATGTTGGTTCCAGGATCTTAATGC TTTCTAAAATGAATGAATGCCATGAAGAGATTTTGTTTTAAATATTGTAT TTGGTACTATTTAGCATATGACAGGTAAAACTGAGGGGAAAATTTAATAC TAATTGTAAATGTTTTAATGGAAAGTACACCTGTGTTCTTCCCCCCACCC ACCCACCCACACACATTTTTTAGTGATAAAAGACTTAATGAAACAAGAGA TTAGTGGTTGCTTTGAATTTAATATATACAGTGCCGTAAAAGAAAATCTG GGCCCTTATAGTTGAAAAAAGAATGTTTTAATAACCTTCCCAGATGATGA AAGATGGTGTTCTTTAATACTACACCAAAACTTGACAGTTGATAGTTTCT TCAGGGATGATTGCAGAGTAGACTCTGGTAGCATATAAAACCTCTTTGCC TTCTTGTTGGCGTGTCTTTCCATTTGAATGGCTCTTTTGTTCATGAATGA TTTTGTGCTGACATACATTGGGTCTGATTTAAGGAGGTCTTTAAATGTTA GATCTGTATCATTCAGTTATGCCACTAACCTCACTAAAACACCCAAAATA TTGGAGACTTGTTTAAGCCCTTTTCTGGCTGACTCCCTGTTAAGGACTGC CTATCGATTGTTTTTTTAGAAACAGGCCACCTTACTTTTCTTCCCTCCCC CCCCG
quality values	Open. Hide. 0 3 6 6 6 6 8 8 8 8 8 8 8 9 9 9 11 16 10 10 6 6 6 6 10 17 7 3 0 3 13 8 6 6 6 6 6 11 10 11 11 9 12 9 9 9 9 9 10 12 12 3 0 0 3 10 3 0 3 8 6 8 11 11 9 9 9 8 8 8 8 8 8 8 3 0 3 6 7 19 24 30 23 23 22 22 23 28 28 35 37 37 37 43 43 32 34 23 18 16 12 16 21 34 59 39 37 37 37 33 30 33 26 25 10 8 6 6 8 8 8 8 8 8 10 16 20 21 15 15 21 18 22 11 11 14 23 23 28 34 24 24 15 16 9 9 11 23 22 37 37 30 30 30 26 32 25 19 19 26 26 19 27 27 36 37 35 28 18 17 17 15 23 21 18 12 11 11 12 21 18 20 19 24 15 13 13 10 10 10 19 13 20 20 35 28 21 12 12 11 11 11 15 23 31 30 24 26 23 23 21 18 12 11 11 11 12 12 21 26 21 12 12 12 10 9 8 8 8 8 8 8 8 10 13 13 10 10 10 12 8 8 9 11 11 10 10 13 13 16 25 33 12 12 11 18 18 21 15 12 12 11 12 11 15 11 12 11 15 15 15 19 11 11 11 12 11 11 16 10 18 9 10 8 8 8 19 15 16 12 12 14 19 22 14 19 19 22 23 30 59 59 47 47 39 39 37 37 36 30 27 16 11 9 10 6 6 6 6 8 12 10 10 12 12 25 27 47 35 24 24 12 24 28 59 59 59 59 59 59 59 48 48 48 48 48 47 47 47 47 36 36 28 22 28 39 39 39 39 39 30 35 35 39 37 37 48 48 50 50 53 57 59 59 59 57 57 59 57 57 57 59 59 68 68 59 59 57 57 59 59 57 57 57 57 57 57 54 54 54 59 59 68 68 68 68 68 68 48 48 46 46 48 57 48 48 48 57 43 43 43 47 47 48 48 48 48 48 59 57 57 57 57 48 48 43 43 36 39 39 41 59 43 43 39 32 34 41 30 30 23 23 20 32 31 36 31 31 32 32 43 43 43 48 48 57 59 48 48 47 46 40 40 40 59 47 25 18 9 9 9 15 16 37 37 37 39 39 41 41 28 28 20 20 20 32 32 35 35 30 25 25 22 26 23 32 32 32 32 28 28 28 28 23 12 8 8 8 8 10 11 28 29 28 28 28 22 25 28 32 32 28 28 21 25 13 13 13 20 14 11 11 11 11 11 18 22 30 37 43 39 28 28 30 34 34 39 37 28 15 10 9 8 8 8 11 10 10 10 8 7 7 9 15 23 14 11 13 10 8 8 8 8 10 10 12 12 12 21 18 24 24 23 24 16 15 14 15 10 10 8 8 8 10 8 8 11 13 8 8 8 11 13 16 15 13 10 10 8 8 6 6 7 7 14 10 9 9 9 9 10 13 9 9 8 12 9 15 15 19 16 13 16 14 16 11 15 15 13 14 17 18 14 11 10 10 8 8 8 8 8 9 12 10 9 8 10 10 10 8 8 3 0 3 8 8 8 10 8 8 8 8 8 8 10 8 8 8 10 8 10 9 9 14 11 16 12 12 8 8 10 10 8 8 8 8 8 8 8 10 8 10 9 9 9 9 7 10 9 9 9 10 13 12 12	Open. Hide. 9 9 9 9 9 9 9 7 8 11 13 19 26 32 44 37 37 37 37 37 37 39 39 39 23 25 12 9 9 9 11 11 9 9 9 12 12 21 21 32 37 37 37 37 36 38 36 36 36 33 48 50 50 43 27 19 10 9 10 10 17 18 15 15 25 19 28 28 28 36 36 44 47 47 42 42 47 47 50 53 53 50 53 53 53 53 50 43 43 47 47 47 47 54 57 54 68 68 68 68 68 68 68 68 68 68 68 68 50 50 57 57 57 57 57 57 48 48 57 57 57 50 50 51 57 68 68 50 51 50 50 50 50 68 68 68 68 68 68 68 68 57 57 50 50 50 50 50 51 68 68 68 68 68 57 57 57 57 68 68 59 68 68 68 57 57 57 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 57 59 59 59 59 59 59 68 59 59 57 57 57 57 57 68 68 68 68 68 68 57 43 27 12 12 15 33 43 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 44 44 41 31 31 35 43 43 62 44 57 57 68 57 57 59 59 57 57 57 57 59 59 59 68 68 68 68 68 68 68 57 59 57 57 59 57 68 68 57 57 57 57 52 57 59 59 59 68 68 68 68 59 57 57 57 57 57 57 68 68 68 68 68 68 68 59 57 57 57 57 57 57 59 59 59 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 57 57 57 59 57 57 54 54 54 57 59 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 68 68 59 57 48 48 46 43 43 43 44 44 54 54 54 57 59 59 59 59 47 47 43 41 37 32 32 30 34 34 46 43 39 40 33 35 35 47 59 47 43 43 43 40 43 43 43 39 40 46 43 41 43 41 37 37 41 43 41 34 34 25 25 25 34 34 48 39 39 35 35 35 39 39 39 39 37 37 37 37 47 43 40 43 32 26 20 34 34 34 33 37 37 37 30 30 31 37 37 37 39 32 31 37 36 32 26 29 30 37 24 28 23 28 28 32 28 23 23 16 22 12 12 12 20 14 15 18 14 14 16 23 30 28 28 29 24 22 25 25 36 29 19 16 16 11 11 19 19 20 18 16 16 11 23 16 13 11 21 16 15 12 9 9 12 10 14 12 15 10 10 11 11 10 13 13 17 15 10 11 11 22 16 12 12 11 13 11 17 14 14 9 9 8 11 8 8 8 8 9 9 9 9 9 9 10 17 15 16 16 21 16 12 14 13 10 10 9 10 11 9 10 10 9 15 12 17 22 25 14 9 8 8 8 8 8 10 16 13 11 9 9 9 9 11 8 8 8 8 8 10 15 10 10 8 8 8 8 9 9 9 8 7 8 8 10 11 24 21 26 25 16 11 10 10 11 8 8 8 8 8 8 8 8 8 8 13 15 13 10 10 10 8 8 9 6 6 6 6 6 6 14 17 27 25 47 26 22 12 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no420_b09.g1 MSMg01no420_b09.g1 CHROMAT_FILE:
MSMg01no420_b09.g1 PHD_FILE: MSMg01no420_b09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:48 2005
         (494 letters)



>mm_chr7_91786202_91787095
          Length = 894

 Score =  884 bits (457), Expect = 0.0
 Identities = 466/469 (99%), Gaps = 2/469 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcagaatgttggttcca-ggatcttaatgctttctaaaatgaatgaatgccatgaagaga 59
           |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tcagaatgttggtt-cagggatcttaatgctttctaaaatgaatgaatgccatgaagaga 410

                                                                       
Query: 60  ttttgttttaaatattgtatttggtactatttagcatatgacaggtaaaactgaggggaa 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ttttgttttaaatattgtatttggtactatttagcatatgacaggtaaaactgaggggaa 350

                                                                       
Query: 120 aatttaatactaattgtaaatgttttaatggaaagtacacctgtgttcttccccccaccc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aatttaatactaattgtaaatgttttaatggaaagtacacctgtgttcttccccccaccc 290

                                                                       
Query: 180 acccacccacacacattttttagtgataaaagacttaatgaaacaagagattagtggttg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 acccacccacacacattttttagtgataaaagacttaatgaaacaagagattagtggttg 230

                                                                       
Query: 240 ctttgaatttaatatatacagtgccgtaaaagaaaatctgggcccttatagttgaaaaaa 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ctttgaatttaatatatacagtgccgtaaaagaaaatctgggcccttatagttgaaaaaa 170

                                                                       
Query: 300 gaatgttttaataaccttcccagatgatgaaagatggtgttctttaatactacaccaaaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gaatgttttaataaccttcccagatgatgaaagatggtgttctttaatactacaccaaaa 110

                                                                       
Query: 360 cttgacagttgatagtttcttcagggatgattgcagagtagactctggtagcatataaaa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 cttgacagttgatagtttcttcagggatgattgcagagtagactctggtagcatataaaa 50

                                                            
Query: 420 cctctttgccttcttgttggcgtgtctttccatttgaatggctcttttg 468
           |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 49  cctctttgtcttcttgttggcgtgtctttccatttgaatggctcttttg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space:   427856
Effective search space used:   427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information