Query= MSMg01no421_c23.b1 MSMg01no421_c23.b1 CHROMAT_FILE:
MSMg01no421_c23.b1 PHD_FILE: MSMg01no421_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:16 2005
(345 letters)
>mm_chr7_57418052_57418796
Length = 745
Score = 600 bits (310), Expect = e-176
Identities = 334/342 (97%)
Strand = Plus / Plus
Query: 1 ttaggtcctggaaatggcaagacatgtaagaaccgtattctccacaaggacataagcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaggtcctggaaatggcaagacatgtaagaaccgtattctccacaaggacataagcttt 260
Query: 61 cggttgtgtcccagggtgtatgtgaggtaggcatagaacatgggagaagatgtacctttt 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 cggttgtgtcccagggtgtatgtgaggtaggcatagaacatgcgagaagatgtacctttt 320
Query: 121 attccatgtgcattacaaagcgagttccacatttccttgcaggcagcacttcatttgagt 180
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attccacgtgcattacaaagtgagttccacatttccttgcaggcagcacttcatttgagt 380
Query: 181 gctgaactgtttgacatctgatccacttccccacacactcttatgtcacttaagttttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctgaactgtttgacatctgatccacttccccacacactcttatgtcacttaagttttga 440
Query: 241 tggtatgtgacgaagatttagttgagtaacttcagctgactacatttctgtgtgtgcatg 300
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggtatgtgacgaagatcaagttgagtaacttcagctgactacatttctgtgtgtgcatg 500
Query: 301 tgtgcctgtgtgcttgcgtgtgtgtgtgtgtgtgtatgtgtg 342
||||||||| |||||| |||||||||||||||||| ||||||
Sbjct: 501 tgtgcctgtatgcttgtgtgtgtgtgtgtgtgtgtgtgtgtg 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_c23.g1 MSMg01no421_c23.g1 CHROMAT_FILE:
MSMg01no421_c23.g1 PHD_FILE: MSMg01no421_c23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:16 2005
(437 letters)
>mm_chr7_57608094_57608929
Length = 836
Score = 723 bits (374), Expect = 0.0
Identities = 414/438 (94%), Gaps = 22/438 (5%)
Strand = Plus / Minus
Query: 1 ctcaccttgagagttggctgctgctgaggtgcagtgattctgggaaaggcagggcata-g 59
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 794 ctcaccttgagagttggctgctgctgaggtgcagtgattctgggaaaggcagagcatatg 735
Query: 60 ggatgcacactgcccctggcatccccaagaagattctaatgccagcttccaaagggtgat 119
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gg-tgcacactgcccctggcatccccaagaagattctaatgccagcttccaaagggtgat 676
Query: 120 gttagggagacttccttctaccaacttgggtatttgggtaattgggaacttccaattcct 179
||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 675 gttagggagacttccttctaccaacttgggtattt--gt----------------tt-ct 635
Query: 180 ctccctcactaatagtttgcagctattggcaggagtgaggttgtgtttatctttcttagt 239
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 634 ctccctcactaatagtttgcagctactggcaggagtgaggttgtgtttatctttcttagt 575
Query: 240 agtcactaaggcatcacagaatgcaacagtgatggttcttggcttggcaggagcttgcaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 agtcactaaggcatcacagaatgcaacagtgatggttcttggcttggcaggagcttgcaa 515
Query: 300 actaggtaggaaatcagaagcacatggggaaacaacaactaatgcctgctttctcagagt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 actaggtaggaaatcagaagcacatggggaaacaacaactaatgcctgctttctcagagt 455
Query: 360 aactgggggaaacgttcctctgagatttacaaaaaaaggatgttttgtaagtctgactac 419
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 454 aactgggggaaacgttcctctgagatttacaaaaaaa-gatgttttgtaagtctgactac 396
Query: 420 agttctgatttgcaggtg 437
||||||||||||||||||
Sbjct: 395 agttctgatttgcaggtg 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 836
Length adjustment: 9
Effective length of query: 428
Effective length of database: 827
Effective search space: 353956
Effective search space used: 353956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
