Query= MSMg01no421_e07.b1 MSMg01no421_e07.b1 CHROMAT_FILE:
MSMg01no421_e07.b1 PHD_FILE: MSMg01no421_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:23 2005
(545 letters)
>mm_chr7_122827679_122828623
Length = 945
Score = 1007 bits (521), Expect = 0.0
Identities = 539/545 (98%)
Strand = Plus / Plus
Query: 1 ctttgcagtaaacacagaagtccacatgatattgtgctagaagtgtaaaaagtccagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttgcagtaaacacagaagtccacatgatattgtgctagaagtgtaaaaagtccagaag 260
Query: 61 cctcgccagcagtcagagtgtctgtggcttgtgctctatcgctgttcttttgacatatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctcgccagcagtcagagtgtctgtggcttgtgctctatcgctgttcttttgacatatcc 320
Query: 121 acatatccttcatggcagagctgcagaccagagaacccagaaagccagagcatcctatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatatccttcatggcagagctgcagaccagagaacccagaaagccagagcatcctatag 380
Query: 181 aatatccatgcaaggagacagtgcaggtctacactgcaattaatagcaaaccagagaccc 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatatacatgcaaggagacagtgcaggtctacactgcaattaatagcaaaccagagaccc 440
Query: 241 caaaggcacggttttattaagggaagctaagcccctcaaacctggaggatcaacctaaca 300
|||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaaggcaagggtacactaagggaagctaagcccctcaaacctggaggatcaacctaaca 500
Query: 301 ctcatgagatttttaatgaaaaattacagatataaaataatatagatgacctccaaaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcatgagatttttaatgaaaaattacagatataaaataatatagatgacctccaaaatt 560
Query: 361 tcaaaacaaatgaatgcatagctcctattgtgatcctggcctagtgtgactccatagcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaaaacaaatgaatgcatagctcctattgtgatcctggcctagtgtgactccatagcca 620
Query: 421 ggatggtagtaattggtgccttttgtttcacttgcccatctctgttcatctgtctgactt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggatggtagtaattggtgccttttgtttcacttgcccatctctgttcatctgtctgactt 680
Query: 481 gttcaaattctagtttgaaagagctaagaatcacatgacaaagtatgacccagtagtgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gttcaaattctagtttgaaagagctaagaatcacatgacaaagtatgacccagtagtgtc 740
Query: 541 tgggt 545
|||||
Sbjct: 741 tgggt 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_e07.g1 MSMg01no421_e07.g1 CHROMAT_FILE:
MSMg01no421_e07.g1 PHD_FILE: MSMg01no421_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:23 2005
(545 letters)
>mm_chr7_123010123_123011067
Length = 945
Score = 1023 bits (529), Expect = 0.0
Identities = 541/549 (98%), Gaps = 8/549 (1%)
Strand = Plus / Minus
Query: 1 cgtggcgagggcattctccacatgcccaccattatctgatgtaatgaaaagagaaagtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cgtggcgagggcattctccacatgcccaccattatctgatgtaatgaaaagagaaagtgt 686
Query: 61 gcagcagcgagattgttaattaatttagcctaacaagatgaagacgaatgaagcagagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcagcagcgagattgttaattaatttagcctaacaagatgaagacgaatgaagcagagca 626
Query: 121 caggatgaatgaaggaagaggtcttatttacaatgtaatacatttttatataatacagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caggatgaatgaaggaagaggtcttatttacaatgtaatacatttttatataatacagat 566
Query: 181 tttacttggtttaaaaatagatccccccaatactatgaacaaaatcaatccccaccccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttacttggtttaaaaatagatccccccaatactatgaacaaaatcaatccccaccccac 506
Query: 241 cattccacatg----tttttcctggcctgacctcacagaaagcaagccagggctccatat 296
||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cattccacatggagc----tcctggcctgacctcacagaaagcaagccagggctccatat 450
Query: 297 ggaagacacttctccaatgtgtaaacagggcttttcttctgctaagaatcctacagtagt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ggaagacacttctccaatgtgtaaacagggcttttcttctgctaagaatcctacagtagt 390
Query: 357 taacctttaactccagggttttattattcctgctgcagacagaggtgagcacaagcacag 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 taacctttaactccagggttttattattcctgctgcagacagaggtgagcacaagcacag 330
Query: 417 agacctggaagcttttaggtctcttgtcctccaggttgccccagacatgccgtctctgtt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 agacctggaagcttttaggtctcttgtcctccaggttgccccagacatgccgtctctgtt 270
Query: 477 gtttaataatcattttattttaattgtctttcactaaaggcaggaatctcaagggctggg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gtttaataatcattttattttaattgtctttcactaaaggcaggaatctcaagggctggg 210
Query: 537 gggtggggt 545
|||||||||
Sbjct: 209 gggtggggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
