Query= MSMg01no421_f24.b1 MSMg01no421_f24.b1 CHROMAT_FILE:
MSMg01no421_f24.b1 PHD_FILE: MSMg01no421_f24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:31 2005
(470 letters)
>mm_chr7_56311396_56312265
Length = 870
Score = 806 bits (417), Expect = 0.0
Identities = 459/477 (96%), Gaps = 7/477 (1%)
Strand = Plus / Minus
Query: 1 caacagctttccactaaggagaccagcacatgggtagatgctggttacgaactgcagcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 caacagctttccactaaggagaccagcacatgggtagatgctggttacgaactgcagcca 483
Query: 61 tggcacctgtgttctgcctctgtgttgatcgctgccccctgataggtcaggcctgaattg 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 482 tggcacctgtgttctgcctctgtgttaatcgctgccccctgataggtcaggcctgaattg 423
Query: 121 aaggctaagggccaagggcctgagagtctgaaacctgtcttcagtgtgctataattctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaggctaagggccaagggcctgagagtctgaaacctgtcttcagtgtgctataattctcc 363
Query: 181 acactctctgtcccttagggaaaaataagaaaaggacaggaactcacttgctacataagg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 actctctctgtcccttagggaaaaataagaaaaggacaggaactcacttgctacataagg 303
Query: 241 ggattttctcttatttccaaacaaggtattcatttatatggtatatccctccgtactaag 300
||||||||||| | ||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 302 ggattttctctgagggccaaacaaggtattcatttatatggcatgtccctccgtactaag 243
Query: 301 gacattttaaaaaatcacttttcctcctgttttcttttct-------ttttttctttttc 353
||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 242 gacattttaaaaagtcacttttcctcctgttttcttttctttttttcttttttctttttc 183
Query: 354 tcccaagacagggtttctctgcataactgccctgtctgtcctggaactctctctgtagat 413
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 182 tcccaagacagggtttctctgcataactgccctatctgtcctggaactcactctgtagat 123
Query: 414 cagggtggccctgaactcccagggatctgtctatctctgcctcctgagtgctgggat 470
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cagggtggccctgaactcccagggatctgtctatctctgcctcctgagtgctgggat 66
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_f24.g1 MSMg01no421_f24.g1 CHROMAT_FILE:
MSMg01no421_f24.g1 PHD_FILE: MSMg01no421_f24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:31 2005
(152 letters)
>mm_chr7_56139725_56140277
Length = 553
Score = 282 bits (146), Expect = 5e-81
Identities = 149/150 (99%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 1 tgtcattgtgtgagtgtgcgtagcatctacaacggttctagaactgaggtcacgtcctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtcattgtgtgagtgtgcgtagcatctacaacggttctagaactgaggtcacgtcctct 260
Query: 61 tgtgcttatcag-agggtggaaggacagttttcccagttccaggacacggcagaagtatg 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgcttatcaggagggtggaaggacagttttcccagttccaggacacggcagaagtatg 320
Query: 120 tgtacaggttctggggagtaggggtgggga 149
||||||||||||||||||||||||||||||
Sbjct: 321 tgtacaggttctggggagtaggggtgggga 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 152
Length of database: 553
Length adjustment: 8
Effective length of query: 144
Effective length of database: 545
Effective search space: 78480
Effective search space used: 78480
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
