Query= MSMg01no422_h08.b1 MSMg01no422_h08.b1 CHROMAT_FILE:
MSMg01no422_h08.b1 PHD_FILE: MSMg01no422_h08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:54 2005
(606 letters)
>mm_chr7_100145234_100146239
Length = 1006
Score = 1040 bits (538), Expect = 0.0
Identities = 579/606 (95%), Gaps = 23/606 (3%)
Strand = Plus / Minus
Query: 1 aagttagatttcacttcttccacttatctatataatgcttatctatatatctatatataa 60
|||||||||||||||||||||||||| ||||||||||| | ||
Sbjct: 848 aagttagatttcacttcttccacttacctatataatgc----c------tc--------- 808
Query: 61 aggagtttccaggacttgcaaaggtctactatagtgctaatgtacttatagttttcacta 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ----ctttccaggacttgcaaaggtctactatagtgctaatgtacttatagttttcacta 752
Query: 121 tttactgatgagatcatgttatgactttagattcaaaacataaagagagcttgatcaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 tttactgatgagatcatgttatgactttagattcaaaacataaagagagcttgatcaatg 692
Query: 181 ataagcattcactgtgtgtctggtgagtgggtgagagaatgaaagaaatcattggtagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ataagcattcactgtgtgtctggtgagtgggtgagagaatgaaagaaatcattggtagtc 632
Query: 241 tcatggtataatgcaacagcatctagacatgaatgaaagttaggtaacaaactctcctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tcatggtataatgcaacagcatctagacatgaatgaaagttaggtaacaaactctcctct 572
Query: 301 ggtctctgttgtagcacaactataccagcaaagggcaaagactgccccaagactcataca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ggtctctgttgtagcacaactataccagcaaagggcaaagactgccccaagactcataca 512
Query: 361 tgattacctgatagccccaaacccaagatcctaaattgccaatgtttgtttcagaaatag 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 511 tgattacctgatagccccaaacccaagatcctaaattgccaatgattgtttcagaaatag 452
Query: 421 tattgcatctgtactggcctgaatagttataatacacattcacaacttcataaatgttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tattgcatctgtactggcctgaatagttataatacacattcacaacttcataaatgttct 392
Query: 481 gaatcaacagcaagtcagacataaaggggtttctcagatactgacacactacttgtcatt 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 391 gaatcaacagcaagtcagacataaaggggtttctcagatactggcacactacttgtcatt 332
Query: 541 ttggaaagataaagagaggaagagtcagatatgaatataaaattatagttcaataacgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ttggaaagataaagagaggaagagtcagatatgaatataaaattatagttcaataacgca 272
Query: 601 aagaag 606
||||||
Sbjct: 271 aagaag 266
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_h08.g1 MSMg01no422_h08.g1 CHROMAT_FILE:
MSMg01no422_h08.g1 PHD_FILE: MSMg01no422_h08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:54 2005
(537 letters)
>mm_chr7_100006714_100007650
Length = 937
Score = 992 bits (513), Expect = 0.0
Identities = 531/537 (98%)
Strand = Plus / Plus
Query: 1 tttggtggaagcctgcaactggagttgactgtgaacatggaacaaagtcttggctttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttggtggaagcctgcaactggagttgactgtgaacatggaacaaagtcttggctttctt 260
Query: 61 caaaatcacattctgagtctgactgagaccttggtcttgaataccttgagggtgatatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaatcacattctgagtctgactgagaccttggtcttgaataccttgagggtgatatgc 320
Query: 121 tttgcaaggatagtttttgtgaaggctggccgcggttctcatttataggataattttctg 180
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 tttgcaaggataatttttgtgaaggctggccacggttctcatttataggataattttctg 380
Query: 181 tgcaaggtacttccagtggtaacaagctatcctgtggtattttagtaatttctgttccaa 240
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 381 tgcaaggtacttccagtggtaacaagttatcctgtggtattttggtaatttctgttccaa 440
Query: 241 tgtccttatctttagcaatataatcaaaaagatcagcagaagcattgtaactaccttcat 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtccttatcgttagcaatataatcaaaaagatcagcagaagcattgtaactaccttcat 500
Query: 301 gatcaccagaagaacttggtgttaagttattattgctaggcctgtaaggcatctctttcg 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 gatcaccagaagaacttggtgttaagttattattgctaggcctgcaaggcatctctttcg 560
Query: 361 atgtatttatactttctgggctactgcaaagggtctctaaaggatatgtgagttttctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgtatttatactttctgggctactgcaaagggtctctaaaggatatgtgagttttctgc 620
Query: 421 atattgtgaaattgtcatcttccttttttggccatctatgcttattttctaatttgtgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atattgtgaaattgtcatcttccttttttggccatctatgcttattttctaatttgtgaa 680
Query: 481 gatcagaagcatcgctgtattttttagaacagttttgtattgccaattttccttttg 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gatcagaagcatcgctgtattttttagaacagttttgtattgccaattttccttttg 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
