Query= MSMg01no422_n19.b1 MSMg01no422_n19.b1 CHROMAT_FILE:
MSMg01no422_n19.b1 PHD_FILE: MSMg01no422_n19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:24 2005
(464 letters)
>mm_chr7_107127325_107128188
Length = 864
Score = 737 bits (381), Expect = 0.0
Identities = 403/415 (97%), Gaps = 10/415 (2%)
Strand = Plus / Plus
Query: 24 ctagcaaatggcttttcctgattcacggttcttgaaaatctcagctgtaggtatgttgcc 83
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ctagcaaatggcttttcctgattcacggttcttgaaaatctcagctgtaggtatgttgct 283
Query: 84 taggcttgcaccaaagaagcctaggtctcggttcatgttacaaacggaattttctatctc 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 taggcttgcaccaaagaagcctaggtctcggttcatgttacaaacggaattttctatctc 343
Query: 144 agacttcagcaccaacaagtgatgggctgccgacggtgagaaaggcaaaggagttcaggc 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 agacttcagcaccaacaagtgatgggctgccgacggtgagaaaggcaaaggagttcaggc 403
Query: 204 caagagtcctacaacagacctttaagttgccagcatcatagatgaaacttacatagaaag 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 caagagtcctacaacagacctttaagttgccagcatcatagatgaaacttacatagaaag 463
Query: 264 acagaaaacagcccccagtttt----accaatctttgtctccaaaacttaaatcccaccc 319
|||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 464 acagaaaacagcccccag----ccaaaccaatctttgtctccaaaacttaaatcccaccc 519
Query: 320 agctttcttcatcaagcaccactaacgtttatgattagtattatcaccaatatagatggc 379
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 520 agctttcttcatcaagcaccactaacgtttatgattagtattatcaccaaaatagatggc 579
Query: 380 atttatctcatcctgtgtggcaagctctgcgctaagcat--atatatatatatat 432
||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 580 atttatctcatcctgtgtggcaagctctgcgctaagcatgcatatatatatatat 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_n19.g1 MSMg01no422_n19.g1 CHROMAT_FILE:
MSMg01no422_n19.g1 PHD_FILE: MSMg01no422_n19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:24 2005
(533 letters)
>mm_chr7_107330802_107331733
Length = 932
Score = 1000 bits (517), Expect = 0.0
Identities = 529/533 (99%), Gaps = 1/533 (0%)
Strand = Plus / Minus
Query: 1 actcttttactgcactgaagaggattctcgtgcttctcgttttgagaagcaaatacatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 actcttttactgcactgaagaggattctcgtgcttctcgttttgagaagcaaatacatac 673
Query: 61 actcagcttttggaaactagaagcatccacataattaaggtaacctctcccggctctccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 actcagcttttggaaactagaagcatccacataattaaggtaacctctcccggctctccc 613
Query: 121 tctctcctggtccgttttccttggaaagggttttcacttggcacaacacaggggggataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tctctcctggtccgttttccttggaaagggttttcacttggcacaacacaggggggataa 553
Query: 181 catggatctgaagagctcaccaaacagttcagagactctgctggctctgagacatctttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 catggatctgaagagctcaccaaacagttcagagactctgctggctctgagacatctttg 493
Query: 241 aggatctctttgtgtatgtcccacaacccctcagttccttgcaaggtgcatctggaagca 300
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aggatctcttcgtggatgtcccacaacccctcagttccttgcaaggtgcatctggaagca 433
Query: 301 gccagagtcgtggtgttaacaggaaaggcccagagctagaaactgggaaggaggcagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gccagagtcgtggtgttaacaggaaaggcccagagctagaaactgggaaggaggcagaag 373
Query: 361 aggagaaagaggaaggaaccagagacacaaacctcagaaccaagggtggatctcccagtt 420
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 372 aggaggaagaggaaggaaccagagacacaaacctcagaaccaagggt-gatctcccagtt 314
Query: 421 cctaagggttgcgcaagcatctttctgtggcttctgacccacccatactcctttcccctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cctaagggttgcgcaagcatctttctgtggcttctgacccacccatactcctttcccctt 254
Query: 481 cctgcaacaactggctcaagctagcctagagttatagttacagaactatgcag 533
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cctgcaacaactggctcaagctagcctagagttatagttacagaactatgcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 932
Length adjustment: 10
Effective length of query: 523
Effective length of database: 922
Effective search space: 482206
Effective search space used: 482206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
