Query= MSMg01no423_e22.b1 MSMg01no423_e22.b1 CHROMAT_FILE:
MSMg01no423_e22.b1 PHD_FILE: MSMg01no423_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:57 2005
(423 letters)
>mm_chr7_138245761_138246583
Length = 823
Score = 511 bits (264), Expect = e-149
Identities = 387/428 (90%), Gaps = 10/428 (2%)
Strand = Plus / Minus
Query: 1 aaacactacaaagaagccatgacaaaatactatgttaac-aggaggagcagggaaggttg 59
||||||||||||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 623 aaacactacaaagaagccatgacaaaatactatatt-actagcaggagcagggaaggttg 565
Query: 60 aagtgggacgtgacttcataaaatgtcactactttgtactggtgactgtcagtggtgtcc 119
|| |||| ||||| |||||||||||||||||| ||| ||| | |||||||||||||| |
Sbjct: 564 gagagggaggtgacatcataaaatgtcactactgtgtgctgctaactgtcagtggtgtgc 505
Query: 120 tgacaagaacaaactgaagagcctcctgcatagaaagagatggcctcaggcgcactcttg 179
||||||||||| ||||| ||||||||||||||| | ||||||||||||| ||||| ||
Sbjct: 504 tgacaagaacagactgaggagcctcctgcataggaccagatggcctcaggtgcactgtta 445
Query: 180 aattgtcctaacaaggacactgagactatgtatagatagttgtacagcagagacttgcaa 239
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 444 aattgtcctaacaaggacactgagactatgtataggtagttgtacagcagagacttgcaa 385
Query: 240 aacca-ctgtagacaacaagagagcgcctgggaacacagcttagtcaatgc-gtgctggg 297
|| || || |||||| |||||||| ||| ||||||| |||||||| ||| | ||||||||
Sbjct: 384 aa-catctatagacaccaagagagggccagggaacatagcttagttaat-cagtgctggg 327
Query: 298 accttactcacttctctggaaatgcactgacctgctcctggtgcctcatggat-tgtgaa 356
|||||||||||| |||||||||||||||||||||||||||||||||||||| | || |||
Sbjct: 326 accttactcactactctggaaatgcactgacctgctcctggtgcctcatgg-tctgagaa 268
Query: 357 ggaactatggggaaaactttg-caccaaataggtaccctcattagcagcactgtcctaat 415
||| ||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 267 ggagctatggggaaaac-ttgacaccaaataggtaccctcattaacagcactgtcctaat 209
Query: 416 gtgtaccc 423
||| ||||
Sbjct: 208 gtgcaccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no423_e22.g1 MSMg01no423_e22.g1 CHROMAT_FILE:
MSMg01no423_e22.g1 PHD_FILE: MSMg01no423_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:57 2005
(505 letters)
>mm_chr7_138047071_138047975
Length = 905
Score = 928 bits (480), Expect = 0.0
Identities = 498/508 (98%), Gaps = 8/508 (1%)
Strand = Plus / Plus
Query: 1 agtggtggcgagaatgtcggaaccttgcgggagagcaggaaacgcacagtgcgtcagtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtggtggcgagaatgtcggaaccttgcgggagagcaggaaacgcacagtgcgtcagtcc 260
Query: 61 tgtgctgcccctgctaacaggatagtctgctttcagtccccaggtcacaggagccacgtc 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 tgtgctgcccctgctaacaggatagtctgcgttcagtccccaggtcacaggagccacgtc 320
Query: 121 caagggagggggcagcctacaaaatacagtaatggctgtcatctgcaggagtctgttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagggagggggcagcctacaaaatacagtaatggctgtcatctgcaggagtctgttcct 380
Query: 181 ctttctagaggagtgaggaactcttctacactaaacagaaagagacagcgagaacactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttctagaggagtgaggaactcttctacactaaacagaaagagacagcgagaacactgt 440
Query: 241 ccctgta----tttttgtgtgacccacctgctgactggtggcagtaacgtgagcacttca 296
||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctgtagggct----gtgtgacccacctgctgactggtggcagtaacgtgagcacttca 496
Query: 297 gggtagcatgcggattgcagcagctcagctccaagcggctgttcttaggctcttttgtaa 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gggtagcatgcggattgcagcagctcagctccaagcggctgttcttaggctcttttgtaa 556
Query: 357 attcatgattggttcagtgttcaagaaagacagaaaggtggggagaactttctggtagaa 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 attcatgattggttcagtgttcaagaaagacagaaaggtggggagaactttctggtagaa 616
Query: 417 aaacaaacaggaattacaagcggctcattcggaaagattacgctgagtgtggagtggagt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aaacaaacaggaattacaagcggctcattcggaaagattacgctgagtgtggagtggagt 676
Query: 477 ggcagcatgcatggctagtgtgtgtgtg 504
|||||| |||||||||||||||||||||
Sbjct: 677 ggcagcgtgcatggctagtgtgtgtgtg 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
