Query= MSMg01no423_p18.b1 MSMg01no423_p18.b1 CHROMAT_FILE:
MSMg01no423_p18.b1 PHD_FILE: MSMg01no423_p18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:48 2005
(499 letters)
>mm_chr7_4413723_4414621
Length = 899
Score = 861 bits (445), Expect = 0.0
Identities = 481/493 (97%), Gaps = 1/493 (0%)
Strand = Plus / Plus
Query: 7 gaattccctgatattcataggtcagctaccctggcgagcagcaaaagagaccctgcctca 66
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattccctgagactcataggtcagctaccctggcgagcagcaaaagagaccctgcctca 267
Query: 67 aacaagataggaggtaaggactgatacctgaggttgtcctctgactaccatatacacacc 126
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aacaagatgggaggtaaggactgatacctgaggttgtcctctgactaccatatacacacc 327
Query: 127 gtgacaaatgggcacctccctttatacacaagtatgcatacaagcaagtgtgtatgcacg 186
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gtgacaaatgg-cacctccctttatacacaagtatgcatacaagcaagtgtgtatgcacg 386
Query: 187 tgcttgcacacacatacacacatgttcacacacacatcaaagatgaagagatgaggactg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 387 tgcttgcacacacatacacacatgttcacacacacatcaaagatgaagagatgaggattg 446
Query: 247 tcgttttaaatcggtgatcagccaggcctctttgaataggtgtcacttggagcaaaagcc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tcgttttaaatcggtgatcagccaggcctctttgaataggtgtcacttggagcaaaagcc 506
Query: 307 ctgtggtagactgggatttgccaggtaagaaatgatagtgagtgggtggatgagctggga 366
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ctgtggtagattggggtttgccaggtaagaaatgatagtgagtgggtggatgagctggga 566
Query: 367 attacagaacggaagaaggagagagacaaggaattggcttccaatctgccctctgttttg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 attacagaacggaagaaggagagagacaaggaattggcttccaatctgccctctgttttg 626
Query: 427 caggcttcgaatctgacattacatctactaaccagcaatcgacttcaacaaatctcttct 486
||||||| ||| || |||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 627 caggctttgaaactaacattacatccactaaccagcaatcgacttcgacaaatctcttct 686
Query: 487 tacttaatatggg 499
|||||||||||||
Sbjct: 687 tacttaatatggg 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no423_p18.g1 MSMg01no423_p18.g1 CHROMAT_FILE:
MSMg01no423_p18.g1 PHD_FILE: MSMg01no423_p18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:48 2005
(510 letters)
>mm_chr7_4606189_4607098
Length = 910
Score = 986 bits (510), Expect = 0.0
Identities = 510/510 (100%)
Strand = Plus / Minus
Query: 1 cagaagggctgcattacagagatttctcagatgaggacactgaggctcaatgcaattaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 cagaagggctgcattacagagatttctcagatgaggacactgaggctcaatgcaattaga 719
Query: 61 gagatttggagagagaaaattccaaccctggtcaggaacagtggtatatgcctataataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gagatttggagagagaaaattccaaccctggtcaggaacagtggtatatgcctataataa 659
Query: 121 ataggcagaaggaatacttgagctctggagtttgaggctgtctggacacacacatagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ataggcagaaggaatacttgagctctggagtttgaggctgtctggacacacacatagaga 599
Query: 181 tttaaacttaggtctttggacatttagtttactttagtcttaagataggatcttgcttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tttaaacttaggtctttggacatttagtttactttagtcttaagataggatcttgcttta 539
Query: 241 tagccccgactagatcaactatctaagttctggcccattaatccaggtttcctttctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tagccccgactagatcaactatctaagttctggcccattaatccaggtttcctttctgtt 479
Query: 301 cttctaggggctatttcacatttgttcagtaagctgttcctttttccttttaaatttgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cttctaggggctatttcacatttgttcagtaagctgttcctttttccttttaaatttgtg 419
Query: 361 gccactccaggagatgatgagtactgagtataaaccgtcatgttttcacgtttcatgttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gccactccaggagatgatgagtactgagtataaaccgtcatgttttcacgtttcatgttc 359
Query: 421 atggccaagtgtccttaggctgttttctgattattcttcctttggggttgggccagagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 atggccaagtgtccttaggctgttttctgattattcttcctttggggttgggccagagtt 299
Query: 481 tctatttcccttagaatggtcctaggatct 510
||||||||||||||||||||||||||||||
Sbjct: 298 tctatttcccttagaatggtcctaggatct 269
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 910
Length adjustment: 10
Effective length of query: 500
Effective length of database: 900
Effective search space: 450000
Effective search space used: 450000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
