Query= MSMg01no425_a10.b1 MSMg01no425_a10.b1 CHROMAT_FILE:
MSMg01no425_a10.b1 PHD_FILE: MSMg01no425_a10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:07 2005
(469 letters)
>mm_chr7_28241229_28242097
Length = 869
Score = 723 bits (374), Expect = 0.0
Identities = 389/394 (98%), Gaps = 1/394 (0%)
Strand = Plus / Minus
Query: 1 cagtctggcctaaatagtgaaaccttgtcagaaaaccccaaacgagcaaacttttggtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cagtctggcctaaatagtgaaaccttgtcagaaaaccccaaacgagcaaacttttggtgc 334
Query: 61 gtcaaagacaccaatatgccggagaagatgtttgctacagcagtgtggattctacatcca 120
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gtcgaagacaccaatatggcggagaagatgtttgctacagcagtgtggattctacatcca 274
Query: 121 ggctctgtgtgaaaagtcaggagacagaaaagggaaaggggtgggtctgaccagtaaaca 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 273 ggctctgtgtgaaaagtcaggagacagaagagggaaaggggtgggtctgaccagtaaaca 214
Query: 181 ctgtgatcctggaaaagaagagccatggtggtgcacactggtaatctcagtgctccgagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ctgtgatcctggaaaagaagagccatggtggtgcacactggtaatctcagtgctccgagg 154
Query: 241 cagagtcaggaggattctcaggggcttagtggccagccagcctagcctgctcagtgagtc 300
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 cagagtcaggagga-tcccaggggcttagtggccagccagcctagcctgctcagtgagtc 95
Query: 301 acctgtcccagtgagaccctgcctcaagaatggaaaagacatgttggatgactcctgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 acctgtcccagtgagaccctgcctcaagaatggaaaagacatgttggatgactcctgaag 35
Query: 361 aattataggcctctacacaaatgtgctccctccc 394
||||||||||||||||||||||||||||||||||
Sbjct: 34 aattataggcctctacacaaatgtgctccctccc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_a10.g1 MSMg01no425_a10.g1 CHROMAT_FILE:
MSMg01no425_a10.g1 PHD_FILE: MSMg01no425_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:07 2005
(248 letters)
>mm_chr7_28034454_28035101
Length = 648
Score = 427 bits (221), Expect = e-124
Identities = 236/241 (97%)
Strand = Plus / Plus
Query: 1 tccatttaacattttttagaccaaggtttaccacaagtaactgaaatgttggaataggat 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccatttaatattttttagaccaaggtttaccacaagtaactgaaatgttggaataggat 260
Query: 61 tctctagtgaccccaaagagtgaccagtgattatcactgtagagccatagagtaaaaact 120
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctctagtgaccccaaggattgaccagtgattatcactgtagagccatagagtaaaaact 320
Query: 121 cttcaataaaaactttataatgtttattacttagtatgtgtgtgtacatgcatgtacatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 cttcaataaaaactttataatgtttattacttagtatgtgtgtgtacatgcgtgtacatg 380
Query: 181 ccattgtacacatgttgttcatgttgttgcacatatgtgggaatcagaggacaactttta 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagtgtacacatgttgttcatgttgttgcacatatgtgggaatcagaggacaactttta 440
Query: 241 a 241
|
Sbjct: 441 a 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
