Query= MSMg01no425_p05.b1 MSMg01no425_p05.b1 CHROMAT_FILE:
MSMg01no425_p05.b1 PHD_FILE: MSMg01no425_p05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:18 2005
(511 letters)
>mm_chr7_105024035_105024945
Length = 911
Score = 758 bits (392), Expect = 0.0
Identities = 404/408 (99%)
Strand = Plus / Minus
Query: 5 gaattcttttattttttgattattccaacaatatatttacggcaggtctgatttaatatg 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gaattcttttaccctttgattattccaacaatatatttacggcaggtctgatttaatatg 349
Query: 65 tacattgtagagaagtgattcgtgacaagtttttctttaagatagcataggcgtgaaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tacattgtagagaagtgattcgtgacaagtttttctttaagatagcataggcgtgaaaaa 289
Query: 125 gcatatgagggaggagttctccctcctgggtattaagaagtatgagacacctcctctcga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gcatatgagggaggagttctccctcctgggtattaagaagtatgagacacctcctctcga 229
Query: 185 gatgccgaattttaaaggtattttcttctcagaaaggaatccccacctggcactgtgaac 244
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gaagccgaattttaaaggtattttcttctcagaaaggaatccccacctggcactgtgaac 169
Query: 245 ctggtcacaagcccctgcctcaggccacagaccacagtgaggacttactgctgttgtgtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 ctggtcacaagcccctgcctcaggccacagaccacagtgaggacttactgctgttgtgtt 109
Query: 305 gttttgctaaaaggacaagttgtcaaactgcctcctaaatatttacgtttatactcatgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 gttttgctaaaaggacaagttgtcaaactgcctcctaaatatttacgtttatactcatgg 49
Query: 365 gtcagtgtttctctcaaccatgaccagagacccttctttctgcagtag 412
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 gtcagtgtttctctcaaccatgaccagagacccttctttctgcagtag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_p05.g1 MSMg01no425_p05.g1 CHROMAT_FILE:
MSMg01no425_p05.g1 PHD_FILE: MSMg01no425_p05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:18 2005
(470 letters)
>mm_chr7_104898883_104899752
Length = 870
Score = 828 bits (428), Expect = 0.0
Identities = 461/474 (97%), Gaps = 7/474 (1%)
Strand = Plus / Plus
Query: 1 atgaaaaccaattgtagatttggatgtttgttagtatgtttttctttctggaactagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 atgaaaaccaattgtagatttggatgtttgttagtatgtttttctttctggaattagttc 260
Query: 61 tttaattatacttatttatattgatcaattgctgtgattagaatatcaaaaagaattcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaattatacttatttatattgatcaattgctgtgattagaatatcaaaaagaattcaa 320
Query: 121 gaagataaaattaccttgtctcatagcctgcataattatttcaattctaagtcataccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagataaaattaccttgtctcatagcctgcataattatttcaattctaagtcataccat 380
Query: 181 atgtatttacatttcaattccaaatccttaacttcagatattatattttttacttttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtatttacatttcaattccaaatccttaacttcagatattatattttttacttttttt 440
Query: 241 --aaaaagatttatttatttatt-attatatgtaaatacactgtagctgtcttcagacac 297
|| |||||||||||||||| ||||||||||| ||||||||||||||| ||||||||
Sbjct: 441 ttaa---gatttatttatttatttattatatgtaagtacactgtagctgtcctcagacac 497
Query: 298 tccagaagagggagtcagatctcgtgatcgg-tggttgtgagccaccatgtggttgctgg 356
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 498 tccagaagagggagtcagatctcgtgatcggatggttgtgagccaccatgtggttgctgg 557
Query: 357 aatttgaactcctgaccttcggaagagcagtcgggtgctcttacccactgagccatctca 416
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 558 gatttgaactcctgaccttcggaagagcagtcaggtgctcttacccactgagccatctca 617
Query: 417 ccagccctattttttacttttttgtttttgctttttattttgttttgagacagt 470
|||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 618 ccagccctattttttatttttttgtttttgctttttattttgttttgagacagt 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
