Query= MSMg01no426_b24.b1 MSMg01no426_b24.b1 CHROMAT_FILE:
MSMg01no426_b24.b1 PHD_FILE: MSMg01no426_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:32 2005
(472 letters)
>mm_chr7_64800976_64801847
Length = 872
Score = 772 bits (399), Expect = 0.0
Identities = 451/469 (96%), Gaps = 4/469 (0%)
Strand = Plus / Plus
Query: 7 gaattcatctggttgtcatttttttttaagctggaagg--ttttttattactattactat 64
||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 205 gaattcatctggttggaatttttttttaagctggaaggttttttttattgctattactat 264
Query: 65 ttcaatttcctcatttgttatgggtctgtttaggtttttgacttcttggtttaattttgg 124
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 265 ttcaatttcctcatttgttatgagtctgtttaggtttttgacttcttggtctaattttgg 324
Query: 125 tagttcagttaaattttaaaattcaggttttcaagcttcatgaagcaccagtttttaaga 184
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 325 tagttcagttaaatttaaaaattcaggtcttcaagcttcatgaagcaccagtttttaaga 384
Query: 185 tattctcttataatattcagaattttgtgtaggttgcaatgtttcccttttatctctgaa 244
||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 385 tattctcttataatattaagaattttgtgtaggttgtaatgtttcccttttatctctgat 444
Query: 245 tctgttcattt-aggtcctttatttcttcttgataatttgggccaagaatctgtccaggg 303
|||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctgtttatttgag-tcctttatttcttcttgataatttgggccaagaatctgtccaggg 503
Query: 304 aatttcttggtcagaaaactatattttaatattgtaacaaatacttccatgcaaagatag 363
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 504 aatttcttggtcagaaaactatattttaatattataagaaatacttccatgcaaagatag 563
Query: 364 actttgtgagtggcaaccaatgcttatattgtatcaattccattaaaaggtgtttgatag 423
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 564 actttgtgagtggcaaccaatgcttatattgtatcaattccattaaaaggggtttgatag 623
Query: 424 tcaaagaaattcaatgtattttcattcttttaaattttttatacaaaat 472
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tcaaagaaattcaatgtattttcattcttttaaattttttatacaaaat 672
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_b24.g1 MSMg01no426_b24.g1 CHROMAT_FILE:
MSMg01no426_b24.g1 PHD_FILE: MSMg01no426_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:32 2005
(405 letters)
>mm_chr7_64949213_64950017
Length = 805
Score = 783 bits (405), Expect = 0.0
Identities = 405/405 (100%)
Strand = Plus / Minus
Query: 1 atttttctgttgaggtatttcatcacggaatccaaacccatttttcaaatgcatctaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 atttttctgttgaggtatttcatcacggaatccaaacccatttttcaaatgcatctaaga 546
Query: 61 aaaagtactgtgttgagatgcatcagagagtagctctgtgtgcctggaacgagaaagggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aaaagtactgtgttgagatgcatcagagagtagctctgtgtgcctggaacgagaaagggc 486
Query: 121 aggaagatcctaagtgtgtcatggacatgctgctccaaaggcccagtagaaaccaaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aggaagatcctaagtgtgtcatggacatgctgctccaaaggcccagtagaaaccaaagct 426
Query: 181 gttggaggagacttcttcatggtgggtggctcctttgctgctgcagggagagtacctcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gttggaggagacttcttcatggtgggtggctcctttgctgctgcagggagagtacctcgc 366
Query: 241 agccatggggcacccacagacactgcaacacagccttgtatgtgcattataaacctaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 agccatggggcacccacagacactgcaacacagccttgtatgtgcattataaacctaggg 306
Query: 301 tgggggcggggctctaggatgagtcatataaagaattgctaattccttagttgatgaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgggggcggggctctaggatgagtcatataaagaattgctaattccttagttgatgaatc 246
Query: 361 tgaggtggttttactgctggaagctcagaatgactttattgtgct 405
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tgaggtggttttactgctggaagctcagaatgactttattgtgct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
