Query= MSMg01no426_f18.b1 MSMg01no426_f18.b1 CHROMAT_FILE:
MSMg01no426_f18.b1 PHD_FILE: MSMg01no426_f18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:52 2005
(454 letters)
>mm_chr7_100279068_100279922
Length = 855
Score = 828 bits (428), Expect = 0.0
Identities = 444/450 (98%), Gaps = 3/450 (0%)
Strand = Plus / Plus
Query: 7 ggaattcagagaat--ttcgcaacaggctgagtttactctgagccactgtaaagtcaccg 64
|||||||||||||| || |||||||||||||||||||||||||| |||||||||||||
Sbjct: 207 ggaattcagagaatagtt-acaacaggctgagtttactctgagccattgtaaagtcaccg 265
Query: 65 agccagaataaagtcacccaatagaggatggtgtgcttgagggtcatcaggatttgtctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 agccagaataaagtcacccaatagaggatggtgtgcttgagggtcatcaggatttgtctt 325
Query: 125 ttcttattctataccatgccctgtttacttatcatgttctttctattggtttcagctgat 184
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 326 ttcttattctataccatgccctgttgacttatcatgttctttctattggtttcagctgat 385
Query: 185 tttatggccatgtgtaggatgtgggagtcactctatccctaacattgtggtgagtttgca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tttatggccatgtgtaggatgtgggagtcactctatccctaacattgtggtgagtttgca 445
Query: 245 tttcaagcttgtatctggggtttcagggagagcttcttgaccattgtgataatgtgaacg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tttcaagcttgtatctggggtttcagggagagcttcttgaccattgtgataatgtgaacg 505
Query: 305 ggtctccctgaatttataggttgtaatgagtgatatgatagaatcaagaggtggggcatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ggtctccctgaatttataggttgtaatgagtgatatgatagaatcaagaggtggggcatt 565
Query: 365 taggagatcagtaaacaataaatgtaggacatttatagaagagagttgagtccatacaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 taggagatcagtaaacaataaatgtaggacatttatagaagagagttgagtccatacaaa 625
Query: 425 agagttggaggaacaagctaccttttgtcc 454
||||||||||||||||||||||||||||||
Sbjct: 626 agagttggaggaacaagctaccttttgtcc 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 855
Length adjustment: 10
Effective length of query: 444
Effective length of database: 845
Effective search space: 375180
Effective search space used: 375180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_f18.g1 MSMg01no426_f18.g1 CHROMAT_FILE:
MSMg01no426_f18.g1 PHD_FILE: MSMg01no426_f18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:52 2005
(463 letters)
>mm_chr7_100483441_100484303
Length = 863
Score = 866 bits (448), Expect = 0.0
Identities = 460/464 (99%), Gaps = 2/464 (0%)
Strand = Plus / Minus
Query: 1 accttaaagttcgagtgctttgttgaggtgtgttgagccagttttctagtggcgagtgct 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 accttaaagtttgagtgctttgttgaggtgtgttgagccagttttctagtggcgagtgct 604
Query: 61 ttcccaagaccgacaattgcttcacgtacttctcttttctttgtctaacctggtacttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ttcccaagaccgacaattgcttcacgtacttctcttttctttgtctaacctggtacttca 544
Query: 121 tcacactgaaaggcagactttttgaaagggactcagatctgtggagtagcccaggcttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tcacactgaaaggcagactttttgaaagggactcagatctgtggagtagcccaggcttca 484
Query: 181 tgttgagagggatccaagtactggaaatttagtgcctcacaactaccaccttgaactttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tgttgagagggatccaagtactggaaatttagtgcctcacaactaccaccttgaactttt 424
Query: 241 tttaattg-acctaagtgacaaagggagggacaaaggagcatgtggataaaagaggtgct 299
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tttaattgaacc-aagtgacaaagggagggacaaaggagcatgtggataaaagaggtgct 365
Query: 300 tgtctactcctcaccacttcatccacagattcttgaaactctttccttagttcttcccgt 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tgtctactccttaccacttcatccacagattcttgaaactctttccttagttcttcccgt 305
Query: 360 ctctaacctgccgctgatcactacacatgtccaccatcaggtaaccctcaggatcaaatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ctctaacctgccgctgatcactacacatgtccaccatcaggtaaccctcaggatcaaatt 245
Query: 420 ctttttatttttccctccgccttctacactaaaggctcctgcag 463
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ctttttatttttccctccgccttctacactaaaggctcctgcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
