Query= MSMg01no426_i12.b1 MSMg01no426_i12.b1 CHROMAT_FILE:
MSMg01no426_i12.b1 PHD_FILE: MSMg01no426_i12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:06 2005
(255 letters)
>mm_chr7_149630224_149630877
Length = 654
Score = 478 bits (247), Expect = e-139
Identities = 253/255 (99%), Gaps = 1/255 (0%)
Strand = Plus / Plus
Query: 1 tgtatcctgtaactggtgggtgtggtcaatgtctggacctgtctaacatgacagaacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 tgtatcctgtaactggtgggtgtggtcaatgtctggacctgtctaacatgacagaacgtg 260
Query: 61 gagaaagatgaccatggactccaacatatctgagtgggagtctgggatcagcttctttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagaaagatgaccatggactccaacatatctgagtgggagtctgggatcagcttctttgt 320
Query: 121 tccttggtgcagtcattcactcagaatggttctggcaggcacacccccaagggaggccta 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 tccttggtgcagtcattcactcagaatggttctggcaggcacacccc-aagggaggccta 379
Query: 181 gtctccattctttcagcactgccctttctcagggtcccatctgaggccagaagtcagacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtctccattctttcagcactgccctttctcagggtcccatctgaggccagaagtcagacg 439
Query: 241 ccatcctggaagtct 255
|||||||||||||||
Sbjct: 440 ccatcctggaagtct 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 654
Length adjustment: 9
Effective length of query: 246
Effective length of database: 645
Effective search space: 158670
Effective search space used: 158670
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no426_i12.g1 MSMg01no426_i12.g1 CHROMAT_FILE:
MSMg01no426_i12.g1 PHD_FILE: MSMg01no426_i12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:06 2005
(379 letters)
>mm_chr7_149783101_149783878
Length = 778
Score = 687 bits (355), Expect = 0.0
Identities = 373/379 (98%), Gaps = 1/379 (0%)
Strand = Plus / Minus
Query: 1 cccaggacaaagatgggggtgcttgaggctgtcaaagagtccctttatgtcccaggccca 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 578 cccaggacaaagatgggggtgcttgaggctgtcacagagtccctttatgtcccaggccaa 519
Query: 61 gtgccccacgttgtcttggctgcaggtgagtttcccagccactgatacctgagggtagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gtgccccacgttgtcttggctgcaggtgagtttcccagccactgatacctgagggtagcc 459
Query: 121 tgctactgcactctgtctccaacagaggagaggactgggaccagccttgccccacaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 458 tgctactgcactctgtctccaacagaggagaggactgggaccagccttgccccccaaatg 399
Query: 181 gagcacaggtctgtgttgagcccagatcaaactctgtggatctgttttcccctagctggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gagcacaggtctgtgttgagcccagatcaaactctgtggatctgttttcccctagctggg 339
Query: 241 aagaggagcaggtgtgtaagagatagcacagggtggtgtctgctgagtgctagccttgcc 300
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 aagaggagcaggtg-ggaagagatagcacagggtggtgtctgctgagtgctagccttgcc 280
Query: 301 tccagggctgtctggccctgttcctctttctcttctgaaaacacacctgtgcatacaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 279 tccagggctgtctggccctgttcctctttctcttctgaaaacacacctgtgcacacaagt 220
Query: 361 gcacaaaggccacagcctt 379
|||||||||||||||||||
Sbjct: 219 gcacaaaggccacagcctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 778
Length adjustment: 9
Effective length of query: 370
Effective length of database: 769
Effective search space: 284530
Effective search space used: 284530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
