Query= MSMg01no426_o05.b1 MSMg01no426_o05.b1 CHROMAT_FILE:
MSMg01no426_o05.b1 PHD_FILE: MSMg01no426_o05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:35 2005
(277 letters)
>mm_chr7_110916764_110917441
Length = 678
Score = 476 bits (246), Expect = e-139
Identities = 267/276 (96%), Gaps = 5/276 (1%)
Strand = Plus / Minus
Query: 5 gaattccagttgc---ttactacaagagctcatagaggacaaatatcaagtgaaaggaat 61
||||||||||||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 478 gaattccagttgcaaa--accacaagagctcatagaggacaaatatcaagcgaaaggaat 421
Query: 62 ttttgatcaaaggcttttggtcttagagaagaagcaagttatctactgaatttaacttac 121
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttttgatcaaaggcatttggtcttagagaagaagcaagttatctactgaatttaacttac 361
Query: 122 agaaatgattcaggtaaggacaaaatgggactgacatttaaatacttagggggaaaagaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agaaatgattcaggtaaggacaaaatgggactgacatttaaatacttagggggaaaagaa 301
Query: 182 tggttgagggtgaagaaaagacggtatgctcctaacttacatagagtttattttgctaat 241
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tggttgagggtgaagaaaagatggtatgctcctaacttacatagagtttattttgctaat 241
Query: 242 gaattaatttctcttatatttatgcatctagtctta 277
||||||||||||||||||||||||||||||||||||
Sbjct: 240 gaattaatttctcttatatttatgcatctagtctta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 678
Length adjustment: 9
Effective length of query: 268
Effective length of database: 669
Effective search space: 179292
Effective search space used: 179292
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no426_o05.g1 MSMg01no426_o05.g1 CHROMAT_FILE:
MSMg01no426_o05.g1 PHD_FILE: MSMg01no426_o05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:35 2005
(510 letters)
>mm_chr7_110818452_110819361
Length = 910
Score = 944 bits (488), Expect = 0.0
Identities = 503/508 (99%)
Strand = Plus / Plus
Query: 3 actcggatctgctgagtcttgatactgtatataatggggttcataaagggtgggaaaagg 62
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 203 actcggatctgctgagtcttgatactgtatataatggggttcatcaagggtgggaaaagg 262
Query: 63 atgtaaatgttgcccatgaggacctgaaccagaggagagagatgcttcccaaagcggtga 122
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atataaatgttgcccatgaggacctgaaccagaggagagagatgcttcccaaagcggtga 322
Query: 123 accatagtcagaccaatgatagggatgtagaaaaccaaaacagcagagatgtgagataca 182
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 323 accatagtcagaccaataatggggatgtagaaaaccaaaacagcagagatgtgagataca 382
Query: 183 catgtttgcaaagacttgattctctcctccctggatgcaatcgatagaactgtgtgcagg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 catgtttgcaaagacttgattctctcctccctggatgcaatcgatagaactgtgtgcagg 442
Query: 243 atcatcacgtaggaggcaagaatgagcactgcatccagtaacagggtgcaaatcaccaga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atcatcacgtaggaggcaagaatgagcactgcatccagtaacagggtgcaaatcaccaga 502
Query: 303 gacagagcatagaaactgttaaagcggatatctgaacaagccattcgaatcaagtcttgg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gacagagcatagaaactgttaaagcggatatctgaacaagccattcgaatcaagtcttgg 562
Query: 363 tgcaggcagaaagagtgggagaggaaatgaggcctgcagtaatttaagaacttcaggcgg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tgcaggcagaaagagtgggagaggaaatgaggcctgcagtaatttaagaacttcaggcgg 622
Query: 423 ataataactggaggaatgagcatagaactcttacataagatggccactccgattttcagg 482
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 623 ataataactggaggaatgagcatagaactcctacataagatggccactccgattttcagg 682
Query: 483 attctgtcattggttaggatggaggaat 510
||||||||||||||||||||||||||||
Sbjct: 683 attctgtcattggttaggatggaggaat 710
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 910
Length adjustment: 10
Effective length of query: 500
Effective length of database: 900
Effective search space: 450000
Effective search space used: 450000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
