Query= MSMg01no426_p23.b1 MSMg01no426_p23.b1 CHROMAT_FILE:
MSMg01no426_p23.b1 PHD_FILE: MSMg01no426_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:44 2005
(394 letters)
>mm_chr7_37322238_37323032
Length = 795
Score = 741 bits (383), Expect = 0.0
Identities = 389/391 (99%), Gaps = 1/391 (0%)
Strand = Plus / Plus
Query: 5 gaattcacgtgagaatac-cagtccccatccttactgagagggcgattaatacaagcagt 63
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacgtgagaaaacacagtccccatccttactgagagggcgattaatacaagcagt 264
Query: 64 tagagcaaggcttaaaaaacgaagccatacattatcctcccaccctacccctcgcacata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagagcaaggcttaaaaaacgaagccatacattatcctcccaccctacccctcgcacata 324
Query: 124 tagattttatttgacctattgcttttaaaatagaataccttcccaggcacgccttccatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagattttatttgacctattgcttttaaaatagaataccttcccaggcacgccttccatg 384
Query: 184 gcaacactgagagacaaaagaggaaaaatgcagatcaattctacattacatgtatgttgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcaacactgagagacaaaagaggaaaaatgcagatcaattctacattacatgtatgttgc 444
Query: 244 cgcatttggcaaaatcaaacgagatcttttcatctccgtcctggaaggaacaaaaacagt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cgcatttggcaaaatcaaacgagatcttttcatctccgtcctggaaggaacaaaaacagt 504
Query: 304 gtaatattatgaaacctcacggagttttatttcccagcgtcttttgtgtccagcctttta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtaatattatgaaacctcacggagttttatttcccagcgtcttttgtgtccagcctttta 564
Query: 364 aattcaagtttttctgccttttttactgaca 394
|||||||||||||||||||||||||||||||
Sbjct: 565 aattcaagtttttctgccttttttactgaca 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 795
Length adjustment: 9
Effective length of query: 385
Effective length of database: 786
Effective search space: 302610
Effective search space used: 302610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_p23.g1 MSMg01no426_p23.g1 CHROMAT_FILE:
MSMg01no426_p23.g1 PHD_FILE: MSMg01no426_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:44 2005
(372 letters)
>mm_chr7_37441129_37441900
Length = 772
Score = 712 bits (368), Expect = 0.0
Identities = 371/372 (99%)
Strand = Plus / Minus
Query: 1 tgttccttgaggctgaaggaattttgagtccagcagtttcttagccttgtgtgtgaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tgttccttgaggctgaaggaattttgagtccagcagtttcttagccttgtgtgtgaaatc 513
Query: 61 caaggcatccataagacaactcaaagcagctggggctggatctgacagactttgaagtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 caaggcatccataagacaactcaaagcagctggggctggatctgacagactttgaagtca 453
Query: 121 aagtcaccccaccatgagggaaggcctctaggagctttctgaaaggtatggactctgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aagtcaccccaccatgagggaaggcctctaggagctttctgaaaggtatggactctgaag 393
Query: 181 atagtacaggcatccctgtggggggaaggaaagggtgatgaccaccccaaaatcaccctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 atagtacaggcatccctgtggggggaaggaaagggtgatgaccaccccaaaatcaccctg 333
Query: 241 aacaacctagttattagaaagagtgtgttgtactaaaaaagaacatcacccaccgagtgt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 332 aacaacctagttattagaaagagtgtgttgtactaaaaaagaacatcacccaccaagtgt 273
Query: 301 gaacactttcccagccctgtacccactacactgacatgaccacatgtcttagagttttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gaacactttcccagccctgtacccactacactgacatgaccacatgtcttagagttttat 213
Query: 361 tgcagtgaacgg 372
||||||||||||
Sbjct: 212 tgcagtgaacgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
