Query= MSMg01no428_k17.b1 MSMg01no428_k17.b1 CHROMAT_FILE:
MSMg01no428_k17.b1 PHD_FILE: MSMg01no428_k17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:55 2005
(245 letters)
>mm_chr7_51660582_51661226
Length = 645
Score = 252 bits (130), Expect = 2e-71
Identities = 136/138 (98%)
Strand = Plus / Minus
Query: 1 actgggctggctttcttacacgcaagttcccgcgcctccggttagaggacaccaaagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 actgggctggctttcttacacgcaagttcccgcgcctccggttagaggacaccaaagaac 379
Query: 61 gcctggctcttaaaaccttggtgactgatggcatcatcagagatccgctggccattggcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gcctggctcttaaaaccttggtgactgatggcatcatcagagatccgctggccattggcg 319
Query: 121 ctcactcttctggctagc 138
| | ||||||||||||||
Sbjct: 318 ccctctcttctggctagc 301
Score = 195 bits (101), Expect = 2e-54
Identities = 104/105 (99%)
Strand = Plus / Minus
Query: 140 cagctgactgggctggctttcttacacgcaagttcccgcgtctccggttagaggacacca 199
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 444 cagctgactgggctggctttcttacacgcaagttcccgcgcctccggttagaggacacca 385
Query: 200 aagaacgcctggctcttaaaaccttggtgactgatggcatcatca 244
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aagaacgcctggctcttaaaaccttggtgactgatggcatcatca 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no428_k17.g1 MSMg01no428_k17.g1 CHROMAT_FILE:
MSMg01no428_k17.g1 PHD_FILE: MSMg01no428_k17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:55 2005
(515 letters)
>mm_chr7_51606331_51607245
Length = 915
Score = 949 bits (491), Expect = 0.0
Identities = 509/515 (98%)
Strand = Plus / Plus
Query: 1 caactttgcttctcacctgcgggactgcgtgggtggtctctcggcttcctgaccttcatc 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caactttgcttctcgcctgcgggactgcgtgggtggtctctcggcttcctgaccttcatc 260
Query: 61 tagaaaaccggggtctttggtgtccagaggaaggactgttggtagcatgcgggtagtaag 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 tagaaaaccggggtctttggtgtccagaggaaggattgttggtagcatgcgggtagtaag 320
Query: 121 tggaggcagatccttgttgagagagaagctagctacttcctaggcgtctctgtgtaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggaggcagatccttgttgagagagaagctagctacttcctaggcgtctctgtgtaaaat 380
Query: 181 aataaccttttcttcttctcaagcacgctttaaactcgctccaagtcaccattatcatgg 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatagccttttcttcttctcaagcacgctttaaactcgctccaagtcaccattatcatgg 440
Query: 241 attcaggcctttgactaattaggaaatggctccccctcctggccagagggtgaaattcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attcaggcctttgactaattaggaaatggctccccctcctggccagagggtgaaattcca 500
Query: 301 ctgaatttctcttgcgcctctgctgttgtatagcttgtatgcagaaggagctaggccagt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 ctgaatttctcttgcgcctctgctgttgtatagcttgtatgcagaaggagctgggccagt 560
Query: 361 ccctaattcctccattggtcttgcgtatctcaacaggggctgcggaagatgacagaccct 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccctaattcctccattggtcttacgtatctcaacaggggctgcggaagatgacagaccct 620
Query: 421 acctagcacccccagccatgaaattcagtcgcagcctgtcagtcccgggttcagaggaca 480
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 acctagcacccccagccatgaaattcagtcgtagcctgtcagtcccgggttcagaggaca 680
Query: 481 tacccccaccacccactacatccccaccagagccg 515
|||||||||||||||||||||||||||||||||||
Sbjct: 681 tacccccaccacccactacatccccaccagagccg 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
