Query= MSMg01no428_o13.b1 MSMg01no428_o13.b1 CHROMAT_FILE:
MSMg01no428_o13.b1 PHD_FILE: MSMg01no428_o13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:13 2005
(563 letters)
>mm_chr7_97063758_97064720
Length = 963
Score = 1033 bits (534), Expect = 0.0
Identities = 556/566 (98%), Gaps = 6/566 (1%)
Strand = Plus / Plus
Query: 1 tatttttccatgacttctgtgtatttcaacattccttggttttaaaaaagctttaagtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatttttccatgacttctgtgtatttcaacattccttggttttaaaaaagctttaagtat 260
Query: 61 aatctacatacacaattccccatttaaagaatacagtacttttagtttactcaaggcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatctacatacacaattccccatttaaagaatacagtacttttagtttactcaaggcagt 320
Query: 121 gtcagcggtatccacaggctgacttgtagagcaccgtttctgtttgataacttttacctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcagcggtatccacaggctgacttgtagagcaccgtttctgtttgataacttttacctt 380
Query: 181 ttttattctggaatacttccatcctcccacaaggcagcctcccctccagtaacagttaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttattctggaatacttccatcctcccacaaggcagcctcccctccagtaacagttaat 440
Query: 241 cctatttc---gtaacccacagtggccttaagcaaccactgacctgtccgtctccagact 297
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccta---ccctgtaacccacagtggccttaagcaaccactgacctgtccgtctccagact 497
Query: 298 cgccttttctagatattttattcaaattaaatcagtatgtagtcttttagtattggtttc 357
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cgccttttctagatattttactcaaattaaatcagtatgtagtcttttagtattggtttc 557
Query: 358 cttcacttaccatgttttcaagattgtccatgccatagctatgtataattcattttttaa 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 558 cttcacttaccatgttttcaagattgtccatgccatagctatgtataattcattttttta 617
Query: 418 aaaagattttatttattttacatatgtgagtacactgtcgctgtcttcagacacaccaga 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aaaagattttatttattttacatatgtgagtacactgtcgctgtcttcagacacaccaga 677
Query: 478 agagggcatcagatcccgttacagatggttgtgagccaccatgcggttgctgggaattaa 537
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 678 agagggcatcagatcccattacagatggttgtgagccaccatgtggttgctgggaattaa 737
Query: 538 actcaggatctctggaagagcagtca 563
||||||||||||||||||||||||||
Sbjct: 738 actcaggatctctggaagagcagtca 763
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no428_o13.g1 MSMg01no428_o13.g1 CHROMAT_FILE:
MSMg01no428_o13.g1 PHD_FILE: MSMg01no428_o13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:13 2005
(530 letters)
>mm_chr7_97218638_97219566
Length = 929
Score = 926 bits (479), Expect = 0.0
Identities = 518/531 (97%), Gaps = 3/531 (0%)
Strand = Plus / Minus
Query: 1 ttacactctgcgtttgctctcctctcctttgtctcttctgggtctctgcttttgtcgtac 60
||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 729 ttacactctgcgtttcctctcccctcctttgtctcttctgggtctctgctcttgtcgtac 670
Query: 61 aaagcacagctcttttctgctcagcagcatccggaagacaacataagatggcatttactc 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aaagaacagctcttttctgctcagcagcatccggaagacaacataagatggcatttactc 610
Query: 121 accatactcaagtaggctgctacagaggtcagctctacaccaggcctgcggcacttcaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 609 accatactcaagtaggctgctacagaggtcagctctacaccaggcctgcggcgcttcaat 550
Query: 181 cagcctgagctgagagtaagagctcggggcgtgctgggagctctgttctatagctcatgg 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 549 cagcctgagctgagagtaagagctc-gggcgtgctgggagctctgttctatagctcatgg 491
Query: 241 acttttggcctgttattctctcacttgactgctcggctgggtgctcctagctaccccctg 300
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 actcctggcctgttattctctcacttgactgctcggctgggtgctcctagctaccccctg 431
Query: 301 gtccttatcgcccttcttttagttttttttattcagcaccaagaactggaggctgacaca 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 430 gtccttatcgcccttcttttagttctttttattcagcaccaagaactggaggctgacaca 371
Query: 361 ggagaagagcctgcagttggtctttggaaactggagagagtgtgggcgagttatatgaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ggagaagagcctgcagttggtctttggaaactggagagagtgtgggcgagttatatgaaa 311
Query: 421 tgaagcgaagctctggcaggaaactagcttctaatcttgaagct-ttccctggtcctttt 479
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 310 tgaagcgaagctctggcaggaaactagcttctaatcttgaag-tgttccctggtcctttt 252
Query: 480 cttttccctcataatcttatgtttgtgggtccctgatcccctctttgcctt 530
||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 251 cttttccttcataatcttatatttgtgggtccctgatcccctctttgcctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 929
Length adjustment: 10
Effective length of query: 520
Effective length of database: 919
Effective search space: 477880
Effective search space used: 477880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
