Query= MSMg01no428_o21.b1 MSMg01no428_o21.b1 CHROMAT_FILE:
MSMg01no428_o21.b1 PHD_FILE: MSMg01no428_o21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:15 2005
(277 letters)
>mm_chr7_144025739_144026415
Length = 677
Score = 468 bits (242), Expect = e-136
Identities = 266/274 (97%), Gaps = 2/274 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgccttgttgcgcttcggggtatccgcagagctgaaggagaccttaggcatct 64
|||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 gaattcttgccttgctgggcttcggggtatccccagagctgaaggagaccttaggcatct 264
Query: 65 ct-cggttgtttgaggaccataaccagagaggataactgtgccagccatgtggggtggag 123
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctacg-ttgtttgaggaccataaccagagaggataactgtgccagccatgtggggtggag 323
Query: 124 gcacagggccagacgaagtgctcctctccagagaggcagatgtgcggtttccctgactca 183
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 324 gcacagggccagacgaagtgctcctctccagagaggcagatgtgcggattccctgactca 383
Query: 184 ggatggatatcctgagttgacaggttccaggtcatacattcaggacaagttacggcatgg 243
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gggtggatttcctgagttgacaggttccaggtcatacattcaggacaagttacggcatgg 443
Query: 244 gtgtggataaggggtgagatggacaagtgtactg 277
||||||||||||||||||||||||||||||||||
Sbjct: 444 gtgtggataaggggtgagatggacaagtgtactg 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no428_o21.g1 MSMg01no428_o21.g1 CHROMAT_FILE:
MSMg01no428_o21.g1 PHD_FILE: MSMg01no428_o21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:15 2005
(245 letters)
>mm_chr7_144171800_144172443
Length = 644
Score = 445 bits (230), Expect = e-129
Identities = 239/242 (98%), Gaps = 1/242 (0%)
Strand = Plus / Minus
Query: 1 atacatttgaggttgcctcagggcttctcattagacttaggggtgtttattactggaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atacatttgaggttgcctcagggcttctcattagacttaggggtgtttattactggaagt 382
Query: 61 actgtgtgcatcgtttaagaagaaaggaggctgggtgatttgattagaaatgttgacagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgtgtgcatcgtttaagaagaaaggaggctgggtgatttgattagaaatgttgacagt 322
Query: 121 tgaggtgtgtaaagaatctgtcattcactcccactctccaacttcagtattcagatcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaggtgtgtaaagaatctgtcattcactcccactctccaacttcagtattcagatcttt 262
Query: 181 catttttcatgccctctttgcagccccctctgaaccgcggatgttggggntggtggggtt 240
||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||
Sbjct: 261 catttttcatgccctctttgcagccccctctgaacagcggatgttgggg-tggcggggtt 203
Query: 241 tg 242
||
Sbjct: 202 tg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 644
Length adjustment: 9
Effective length of query: 236
Effective length of database: 635
Effective search space: 149860
Effective search space used: 149860
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
