Query= MSMg01no429_e17.b1 MSMg01no429_e17.b1 CHROMAT_FILE:
MSMg01no429_e17.b1 PHD_FILE: MSMg01no429_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:44 2005
(501 letters)
>mm_chr7_69176966_69177866
Length = 901
Score = 901 bits (466), Expect = 0.0
Identities = 490/498 (98%)
Strand = Plus / Minus
Query: 4 ggaattctcttattatttttactaattaagagtcacagatacacctttcccatcctgact 63
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 701 ggaattctcttattatttttactaattaagagtcacagacacacctttcccatcctgact 642
Query: 64 taactttcagaatgaaattgtcactgtagtttgggatataattgatcccaaaatttactc 123
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 641 taactttcagaatgaaattgtcactgcagtttgggatataattgatcccaaaatttactc 582
Query: 124 acttctctcattctctctgctcacaacactctattgatgaaagacaagggaagaagcctg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 acttctctcattctctctgctcacaacactctattgatgaaagacaagggaagaagcctg 522
Query: 184 cccatactttcatggaaagaattttacctgcaaaatgtcttttctctatttggcttgtca 243
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 521 cccatactttcatggaaagaattttacctgcaaaatatcttttctctatttggcttgtca 462
Query: 244 cctcaatttactgaccaatgtcccctgattagcaactccttccattctctagtgacttta 303
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 461 cctcaatttactgaccaatgtcccctgattagcaactccttccattctccagtgacttta 402
Query: 304 gatgtgttatgttatatacattattaaaattatattacctcatctgagttgctattttga 363
||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 401 gatgtgttacgttatgtacattattaaaattatattaccttatctgagttgctattttga 342
Query: 364 atcaaaaggttttctaaaattgttttcattacatactaacatgtggctcttgtaattttc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 atcaaaaggttttctaaaattgttttcattacatactaacatgtggctcttgtaattttc 282
Query: 424 atgttaattttattctctccaagtttgtcttcttgtggagaatctgagaggaaaacagaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atgttaattttattctctccaagtttgtcttcttgtggagaatctgagaggaaaacagaa 222
Query: 484 taaaacatgatagaaaat 501
|||||| |||||||||||
Sbjct: 221 taaaacgtgatagaaaat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_e17.g1 MSMg01no429_e17.g1 CHROMAT_FILE:
MSMg01no429_e17.g1 PHD_FILE: MSMg01no429_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:44 2005
(277 letters)
>mm_chr7_69021044_69021719
Length = 676
Score = 455 bits (235), Expect = e-132
Identities = 262/271 (96%), Gaps = 5/271 (1%)
Strand = Plus / Plus
Query: 1 agttctgtataaacctgggtgagtggatagagttttttgaggtgagtgtacattattgcc 60
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 201 agttctgtataaacctgggtgagtggatagatttttttgagatgagtgtacattattgcc 260
Query: 61 tggggctgaagtattaggt-gtgcttcatttatatgaagaagaattccagtcatttaagt 119
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggggctgaagtattag-tcgtgcttcatttatatgaagaagaattccagtcatttaagt 319
Query: 120 cagtaatttggccatgaggctttttgattcgctcaagcatggcaga-ggtggtggtcaat 178
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 320 cagtaatttggccatgaggctttttgattcgctcaagcatggcc-acggtggtggtcaat 378
Query: 179 gaacatgtgcactgtagcatacagacccacaacagggaggggagaatccttactcctgcc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaacatgtgcactgtagcatacagacccacaacagggaggggagaatccttactcctgcc 438
Query: 239 agtctcatgaggagatttgggggangggggg 269
||||||| |||||||||||||||| ||||||
Sbjct: 439 agtctcaagaggagatttggggga-gggggg 468
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 676
Length adjustment: 9
Effective length of query: 268
Effective length of database: 667
Effective search space: 178756
Effective search space used: 178756
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
