Query= MSMg01no431_d17.b1 MSMg01no431_d17.b1 CHROMAT_FILE:
MSMg01no431_d17.b1 PHD_FILE: MSMg01no431_d17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:26 2005
(433 letters)
>mm_chr7_87067945_87068777
Length = 833
Score = 456 bits (236), Expect = e-132
Identities = 309/346 (89%), Gaps = 26/346 (7%)
Strand = Plus / Minus
Query: 106 catcaaacattggtaagatagctccatgagtcaaggtgctttgccaccaagcctggagcc 165
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 833 catcaaacattggtaagatagctccgtgagtcaaggtgctttgccaccaagcctgaagcc 774
Query: 166 gagttcagtcctcagaactcacttggtgggagagggagccaactccatcagttgtttgct 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 gagttcagtcctcagaactcacttggtgggagagggagccaactccatcagttgtttgct 714
Query: 226 gactgtagtactcatgcacacagcattttctgggcaccccaacatacgcacgcactca-- 283
| |||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 713 g--------actcatgcacacagcagcatctgggcaccccaacatacgcacgcacgcacg 662
Query: 284 ----ca--ca--a---a--ca---aaaaaaagaaaaagtaaaggatttcaggcttagcag 327
|| || | | || ||| |||||||||||||| |||||||||||||||||
Sbjct: 661 caggcaggcatcatgcacgcatgcaaacaaagaaaaagtaaaagatttcaggcttagcag 602
Query: 328 ttagaaaaactgagacaaaaccctcttcccaggacagaaagatggcttggctcaaactgt 387
|||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 601 ttagaaaaaccgagacaaaaccctcttcgcaggacagaaagatggcttgtctcaaactgt 542
Query: 388 gtggggtccgtaaatagctgggaaagacccatattttcattctgtc 433
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtggggtccgtaaatagctgggaaagacccatattttcattctgtc 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_d17.g1 MSMg01no431_d17.g1 CHROMAT_FILE:
MSMg01no431_d17.g1 PHD_FILE: MSMg01no431_d17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:26 2005
(411 letters)
>mm_chr7_86870948_86871755
Length = 808
Score = 748 bits (387), Expect = 0.0
Identities = 404/411 (98%), Gaps = 3/411 (0%)
Strand = Plus / Plus
Query: 1 cctgaagatgctgaggggtatcccctatcccagagcagggccagtaagacctgtatcccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgaagatgctgaggggtatcccctatcccagagcagggccagtaagacctgtatcccc 260
Query: 61 cccactgatcctcaggtactgagtggccatctggctcccaggatggccaaccagtctgga 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccactgatcctcgggtactgagtggccatctggctcccaggatggccaaccagtctgga 320
Query: 121 tggcagatacctgactcctccttgtctggtggcaggaggaactctaccaccttctcgatg 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggcagatacctgactcct---tgtctggtggcaggaggaactctaccaccttctcgatg 377
Query: 181 cttcccagagctagatcagcccctccagaggccagtcggccaacccgggtgttggcggca 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cttcccagagccagatcagcccctccagaggccagtcggccaacccgggtgttggcggca 437
Query: 241 tattctgctgtctctttggccatccccaaggcaagctcgcagccggccagagtggccccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tattctgctgtctctttggccatccccaaggcaagctcgcagccggccagagtggccccc 497
Query: 301 agaaccttgtcagaagtgcttgcaatgggcacactgatgctgttcctggcgcttcgaagg 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agaaccttgtcagaggtgcttgcaatgggcacactgatgctgttcctggcgcttcgaagg 557
Query: 361 cgggtagagatggtgcccttcatttcagaggcgatctgaggagtgttggga 411
|||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 558 cgggtagagatggtgcccttcagttcagaggcgatctgaggagtgttggga 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 808
Length adjustment: 9
Effective length of query: 402
Effective length of database: 799
Effective search space: 321198
Effective search space used: 321198
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
