Query= MSMg01no431_e17.b1 MSMg01no431_e17.b1 CHROMAT_FILE:
MSMg01no431_e17.b1 PHD_FILE: MSMg01no431_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:32 2005
(515 letters)
>mm_chr7_143687705_143688619
Length = 915
Score = 934 bits (483), Expect = 0.0
Identities = 503/510 (98%), Gaps = 2/510 (0%)
Strand = Plus / Minus
Query: 7 ggaattctattgtgtctacgtccgccagcattacagactgttc-ttcgagaagcctgtgt 65
|||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 715 ggaattctattgtgtccaagtccgccagcattacagactgttctttc-agaagcctgtgt 657
Query: 66 ctaggagcaggataggggctgttcagagccacctttcttcagcctgctgggctttggggc 125
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ctaggagcaggatagaggctgttcagagccacctttcttcagcctgctgggctttggggc 597
Query: 126 tactcggttgcctggtgcagcactgaggagtatttttagagctgtagtcagtgggaggag 185
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tactcggttgcctggtgaagcactgaggagtatttttagagctgtagtcagtgggaggag 537
Query: 186 aaaggatttgccttttaaacacagagcaagctctgtgggcaggaggacacctctcacatt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aaaggatttgccttttaaacacagagcaagctctgtgggcaggaggacacctctcacatt 477
Query: 246 gtgtttagatcttttccttaatctaaatgccaggacagaaccctttctaggaagtgaaac 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gtgtttagatcttttccttaatctaaatgccaggacagaaccctttctaggaagtgaaac 417
Query: 306 ccacacgatcgtacttataaatagcccagcgctgctcggcaaggaacaaaaatactcacc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ccacacgatcgtacttataaatagcccagcgctgctcggcaaggaacaaaaatactcacc 357
Query: 366 ctggctctcctgccacaagtgccggcttggaaggatgctgtcatcagatcactcataccc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ctggctctcctgccacaagtgccggcttggaaggatgctgtcatcagatcactcataccc 297
Query: 426 tttccccagtcattgtgggcaaagacaatgccatcttcccgaaaggaaacagccataaaa 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tttccccagtcattgtgggcaaagacaatgccatcttcccgaaaggaaacagccataaaa 237
Query: 486 cctcctccatgacttcctnaaagagctttc 515
|||||||||||||||||| |||||||||||
Sbjct: 236 cctcctccatgacttcctaaaagagctttc 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_e17.g1 MSMg01no431_e17.g1 CHROMAT_FILE:
MSMg01no431_e17.g1 PHD_FILE: MSMg01no431_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:32 2005
(457 letters)
>mm_chr7_143483085_143483941
Length = 857
Score = 837 bits (433), Expect = 0.0
Identities = 451/457 (98%)
Strand = Plus / Plus
Query: 1 agagagaaaggtgggcagagagaagaaatggagatctgggttttaaagatgcgtaaggca 60
|||||||||||||||||||||||||| |||| || ||||||||||||||||| |||||||
Sbjct: 201 agagagaaaggtgggcagagagaagacatggggagctgggttttaaagatgcataaggca 260
Query: 61 agcctgggggccagtcacagaacagcaagggctgaaagagagatggctagagcaagctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcctgggggccagtcacagaacagcaagggctgaaagagagatggctagagcaagctga 320
Query: 121 aggtggagggtgagtgtatagtgtctaagaggatgtgggaacagggccacagacagttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggtggagggtgagtgtatagtgtctaagaggatgtgggaacagggccacagacagttcc 380
Query: 181 taattagattccagaggtctgagctttatcacagtaaggagcctggcagagggttagcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taattagattccagaggtctgagctttatcacagtaaggagcctggcagagggttagcct 440
Query: 241 gagtgggtcttcatagctaacaaattcttagacagtgcaagtccaaatgtccctagaggt 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 gagtgggtcttcatagctaacaaattcttagacagtgcaagtcgaaatgtccctagaggt 500
Query: 301 agagctatttgaaaggacagtgaaaatcagaacttggtccctggggaaagaaatatttga 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 agagctatttgaaaggacagtgaaaatgagaacttggtccctggggaaagaaatatttga 560
Query: 361 agcagacgaaataaaacaattccagatcaggcaggattgataccccaggctaacctaagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcagacgaaataaaacaattccagatcaggcaggattgataccccaggctaacctaagg 620
Query: 421 aaggcttcaggccaggaagggctctgaatattttggg 457
|||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaggcttcaggccaggaagggctctgaatattttggg 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
