Query= MSMg01no431_f24.b1 MSMg01no431_f24.b1 CHROMAT_FILE:
MSMg01no431_f24.b1 PHD_FILE: MSMg01no431_f24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:39 2005
(333 letters)
>mm_chr7_127512210_127512942
Length = 733
Score = 547 bits (283), Expect = e-160
Identities = 311/323 (96%), Gaps = 6/323 (1%)
Strand = Plus / Minus
Query: 6 gaattcagaaaggtgatactcgcagagaaagcaagacaataaactgctatagtgtgctgt 65
|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 320 gaattcagaaaggtgagactcgcagagaaagcaagacaataaactgctatagtatgctgt 261
Query: 66 ttcccatgatactttattcttagatacatgtaattgtgattttctaacaaaactattaag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 260 ttcccatgatactttattcttagatacatgtaattgtgattttctaacaaaac---taag 204
Query: 126 atcctctatgaagagattgacagttgatggctgatagataaaggagagtcacctttcttt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 203 atcctctatgaagagattgacagttgatggctgatagataaaggagagtcacccttcttt 144
Query: 186 ggaggcatggccactgtttcccagtagttggctctttactcgtgtacatatgggcaagac 245
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 143 ggaggcatggccactgtttcccagtagttggctctttactcgtgtacatatgggcaaggc 84
Query: 246 taactggactcagcaggttattta---aaaaaaatagatacaaaattgggagggaagtgt 302
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 83 taactggactcagcaggttatttttttaaaaaaatagatacaaaattgggagggaagtgt 24
Query: 303 gtagtaggggctggggagagttg 325
|||||||||||| ||||||||||
Sbjct: 23 gtagtaggggctagggagagttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_f24.g1 MSMg01no431_f24.g1 CHROMAT_FILE:
MSMg01no431_f24.g1 PHD_FILE: MSMg01no431_f24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:39 2005
(434 letters)
>mm_chr7_127332761_127333593
Length = 833
Score = 799 bits (413), Expect = 0.0
Identities = 428/433 (98%), Gaps = 1/433 (0%)
Strand = Plus / Plus
Query: 1 aaggtgacaggtggcgaagaaaccgtggctctgagccatcaggtcacttgcctaaggtca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 aaggtgacaggtggcgaagaaaccgtggctctgagccatcaggtcacttgcctaagatca 260
Query: 61 catatccagtgcatgatgtaggaagaatgtaatccagaacagtccaactccagagttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catatccagtgcatgatgtaggaagaatgtaatccagaacagtccaactccagagttcat 320
Query: 121 gggcttagctactccacccaaacatgtaaatgattgacccaaatgatggactctgtaacg 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggcttatctactccacccaaacatgtaaatgattgacccaaatgatggactctgtaacg 380
Query: 181 actcagccgccgagcctggtaacccatccatttctcctttcccctgccatacatgtgctt 240
|||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 381 actcagccgcagagcctggtaaaccatccatttctccttt-ccctgccatacatgtgctt 439
Query: 241 tggttggatttgtgcccagggaacaattcatgagtcttacccaaagatttgaacactgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tggttggatttgtgcccagggaacaattcatgagtcttacccaaagatttgaacactgtg 499
Query: 301 gtcttctcacagtgtgcaggcttcgctcctgaaatcacttctccaagctcagcaaagatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtcttctcacagtgtgcaggcttcgctcctgaaatcacttctccaagctcagcaaagatg 559
Query: 361 tcagcctgtgaaacaaatgcatgctaagtagtgctgaaaccatcatcccgtgcagggctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcagcctgtgaaacaaatgcatgctaagtagtgctgaaaccatcatcccgtgcagggctg 619
Query: 421 gcttctgaagcca 433
|||||||||||||
Sbjct: 620 gcttctgaagcca 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 833
Length adjustment: 9
Effective length of query: 425
Effective length of database: 824
Effective search space: 350200
Effective search space used: 350200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
