Query= MSMg01no431_m19.b1 MSMg01no431_m19.b1 CHROMAT_FILE:
MSMg01no431_m19.b1 PHD_FILE: MSMg01no431_m19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:16 2005
(448 letters)
>mm_chr7_105653086_105653934
Length = 849
Score = 783 bits (405), Expect = 0.0
Identities = 432/445 (97%), Gaps = 8/445 (1%)
Strand = Plus / Plus
Query: 5 gaattctgtttgtaatatcca-ctcagctccgggggccacctctgctcttggggccacct 63
||||||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtttgtaaaatcaaactcagatccgggggccacctctgctcttggggccacct 264
Query: 64 ttgctttggagggggagggcaaactgccccgctgtatctccacttctccatctgtatcat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgctttggagggggagggcaaactgccccgctgtatctccacttctccatctgtatcat 324
Query: 124 gggctcaatcataaacatgcttatttgtaatgtgtgaatgcttgaacatactcgaggtcc 183
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gggctcaatcataaacattcttatttgtaatgtgtgaatgcttgaacatactcgaggtcc 384
Query: 184 tgggtgctgggtctgtgagaaccctggggactgttaaaaaaaaaaaaaaacctctgctgt 243
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 385 tgggtgctgggtctgtgagaaccctggggactgttaaaaaaaa-------cctctgctgt 437
Query: 244 gggaggggagactcaggctggagcacaggccaggaagctgtccatagtgagggaggtttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gggaggggagactcaggctggagcacaggccaggaagctgtccatagtgagggaggtttt 497
Query: 304 atgctctgagagtttgtttgcagctaggcacaagactcacagctggagcagcaaggggct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 atgctctgagagtttgtttgcagctaggcacaagactcacagctggagcagcaaggggct 557
Query: 364 tggaaggcctctgagctgcctacagggacagcagggtgtcagcttgagcagagaggtcca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tggaaggcctctgagctgcctacagggacagcagggtgtcagcttgagcagagaggtcca 617
Query: 424 agggagagctccatctggctgcagg 448
||||||||| |||||||||||||||
Sbjct: 618 agggagagccccatctggctgcagg 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 849
Length adjustment: 10
Effective length of query: 438
Effective length of database: 839
Effective search space: 367482
Effective search space used: 367482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_m19.g1 MSMg01no431_m19.g1 CHROMAT_FILE:
MSMg01no431_m19.g1 PHD_FILE: MSMg01no431_m19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:16 2005
(395 letters)
>mm_chr7_105835606_105836400
Length = 795
Score = 733 bits (379), Expect = 0.0
Identities = 391/395 (98%)
Strand = Plus / Minus
Query: 1 ttttgcttttatttatttattgttatgtttgtggattatgagtgtgtgcctgcctgcagc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 780 ttttgcttttatttatttattgttatatttgtggattatgagtgtgtgcctgcatgcagc 721
Query: 61 gggaactggcttccctagaaccagagctacagatgggtctgagctaccatgtgcgttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gggaactggcttccctagaaccagagctacagatgggtctgagctaccatgtgcgttctt 661
Query: 121 agaattgaacctgagtcttctggaagagcagcagtgctcttagcagctgtgccatctctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 agaattgaacctgagtcttctggaagagcagcagtgctcttagcagctgtgccatctctc 601
Query: 181 cagccatctgagatttgtttttaacaggtaaagtgttttgagatgtgtgtttcttctcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 cagccatctgagatttgtttttaacaggtaaagtgttttgagatgtgtgtttcttctcta 541
Query: 241 gttatgtgtatgcatatttgtctgtgttatacatgcatatgtgcaggcacccaaggaggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gttatgtgtatgcatatttgtctgtgttatacatgcatatgtgcaggcacccaaggaggc 481
Query: 301 caggaactagttcccctggcactagagctacagggggcctgagcttcccagtgtgggttc 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 480 caggaactagttcccctggcactagagctacagggggcctgagcttcgcagtgtgggttc 421
Query: 361 tgggactagaactcttgtcttgttgagacaagagc 395
||||| |||||||||||||||||||||||||||||
Sbjct: 420 tgggaatagaactcttgtcttgttgagacaagagc 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
