Query= MSMg01no432_d09.b1 MSMg01no432_d09.b1 CHROMAT_FILE:
MSMg01no432_d09.b1 PHD_FILE: MSMg01no432_d09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:51 2005
(224 letters)
>mm_chr7_47159289_47159912
Length = 624
Score = 433 bits (224), Expect = e-126
Identities = 224/224 (100%)
Strand = Plus / Minus
Query: 1 ccaagtaactgaactaattgaaaaccatttttggtgtagggtctgcatggtggacctgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ccaagtaactgaactaattgaaaaccatttttggtgtagggtctgcatggtggacctgtc 365
Query: 61 cgtgtgtatgtgtaggtacacgtgtatgcctatgtgtgacgtgcagataggctagttgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cgtgtgtatgtgtaggtacacgtgtatgcctatgtgtgacgtgcagataggctagttgtc 305
Query: 121 attgggtgtctgtcacttatttccaccctaattttaaaacgtacgttgatttgtttccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 attgggtgtctgtcacttatttccaccctaattttaaaacgtacgttgatttgtttccag 245
Query: 181 tacatgtttgtgtttgttcgtgtgtgttggttgcttggtgtgaa 224
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tacatgtttgtgtttgttcgtgtgtgttggttgcttggtgtgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space: 132225
Effective search space used: 132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no432_d09.g1 MSMg01no432_d09.g1 CHROMAT_FILE:
MSMg01no432_d09.g1 PHD_FILE: MSMg01no432_d09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:51 2005
(346 letters)
>mm_chr7_46986938_46987683
Length = 746
Score = 621 bits (321), Expect = 0.0
Identities = 337/349 (96%), Gaps = 12/349 (3%)
Strand = Plus / Plus
Query: 1 ttttgatttataagcaactgtggtatctgatacttctttgctactgtgttgtgactgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttgatttataagcaactgtggtatctgatacttctttgctactgtgttgtgactgtta 260
Query: 61 ctgactccagttgatgagacagagaggctgttcagatgatgtgagcagtgtcctgatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgactccagttgatgagacagagaggctgttcagatgatgtgagcagtgtcctgatcct 320
Query: 121 gcatgaaggtgtgaggcaaagaaaagcagccgagaaggccatgccctgtcctctccctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatgaaggtgtgaggcaaagaaaagcagccgagaaggccatgccctgtcctctccctac 380
Query: 181 cccaggatgccctgctgcttcctagcagtgttctgacctttccctgccaagtaaaaagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccaggatgccctgctgcttcctagcagtgttctgacctttccctgccaagtaaaaagcc 440
Query: 241 aaactagtgatttttt------ggcagaagtctaataatattcatgaagtctgatggctt 294
|||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaactagtga------aagcaaggcagaagtctaataatattcatgaagtctgatggctt 494
Query: 295 acaaatagtgtcttaaaacgcaaggtgttagaattgcaaaaacttttga 343
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 acaaatagtgtcttaaaacgcaaggtgttagaattgcaaaaacttttga 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
