Query= MSMg01no434_g09.b1 MSMg01no434_g09.b1 CHROMAT_FILE:
MSMg01no434_g09.b1 PHD_FILE: MSMg01no434_g09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:48 2005
(492 letters)
>mm_chr7_114181510_114182401
Length = 892
Score = 942 bits (487), Expect = 0.0
Identities = 490/491 (99%)
Strand = Plus / Plus
Query: 2 cctcatactgtgccatgttgatcagaccacatttgaaacatccttcacttagatacacat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cctcatactgtgccatgttgatcagaccacatttgaaacatccttcacttagatacacat 261
Query: 62 tgataaactaaaaagtttatacaaaggtaatcacactccttacatacttttagactggaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgataaactaaaaagtttatacaaaggtaatcacactccttacatacttttagactggaa 321
Query: 122 gggttcaagtgaggagaggagagatatttataaaagagggtttgcacaaacattcacata 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gggttcaagtgaggagaggagagatatttataaaagagggtttgcacaaacattcacata 381
Query: 182 aatcagtaaagccactagcagccagaagagtcatacactagagtgtaggtgaacacagcc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aatcagtaaagccactagcagccagaagagtcatacactagagtgtaggtgaacacagcc 441
Query: 242 caaaagccatcactatgtgtcataagtcatatgcagtgtgatgaaagggttatttagaat 301
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 caaaagccatcactatgtgccataagtcatatgcagtgtgatgaaagggttatttagaat 501
Query: 302 atactgggtaaatatatgttcaactaaagagaccacaacacaccatgtcagacatgaaga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atactgggtaaatatatgttcaactaaagagaccacaacacaccatgtcagacatgaaga 561
Query: 362 ttctatagaataaagttgcagatagctaaaactaaggggtgagggccaggtggaggactt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttctatagaataaagttgcagatagctaaaactaaggggtgagggccaggtggaggactt 621
Query: 422 ggaaatggggtagaattggtgctttccttcatcttttttaacacagattctctaccttaa 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ggaaatggggtagaattggtgctttccttcatcttttttaacacagattctctaccttaa 681
Query: 482 gtatcctgtgt 492
|||||||||||
Sbjct: 682 gtatcctgtgt 692
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no434_g09.g1 MSMg01no434_g09.g1 CHROMAT_FILE:
MSMg01no434_g09.g1 PHD_FILE: MSMg01no434_g09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:48 2005
(249 letters)
>mm_chr7_114352141_114352789
Length = 649
Score = 422 bits (218), Expect = e-122
Identities = 235/248 (94%), Gaps = 12/248 (4%)
Strand = Plus / Minus
Query: 1 aaaagccgttaggcgaagaagaaagaaagttccattgctcttaatgagaagaatcccaag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aaaagccgttaggcgaagaagaaagaaagttccattgctcttaatgagaagaatcccaaa 507
Query: 61 gcattccaaacctagttacccacacgagtttaaaacaaacaaacaaacaaacaaacaaac 120
|||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 506 gcattccaaacctagttacccacacgagttta------------aaacaaacaaacaaac 459
Query: 121 aaacaaacaaccccctggaaaatgaaattaggagtcgtttaaaagatttagaacggagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aaacaaacaaccccctggaaaatgaaattaggagtcgtttaaaagatttagaacggagtt 399
Query: 181 tgtatataaagcttagtcatgagatgcggggtttattttttcccctgaagggaagaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tgtatataaagcttagtcatgagatgcggggtttattttttcccctgaagggaagaaggt 339
Query: 241 gttggaag 248
||||||||
Sbjct: 338 gttggaag 331
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
