Query= MSMg01no436_g23.b1 MSMg01no436_g23.b1 CHROMAT_FILE:
MSMg01no436_g23.b1 PHD_FILE: MSMg01no436_g23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:30 2005
(566 letters)
>mm_chr7_88082590_88083555
Length = 966
Score = 1042 bits (539), Expect = 0.0
Identities = 557/563 (98%)
Strand = Plus / Minus
Query: 4 ggaattctctataaatttccggactggtgattcttggggaattcttggtgattcttcggc 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ggaattctctataaagagcaggactggtgattcttggggaattcttggtgattcttcggc 707
Query: 64 ctccattccccaagtgctaggattgtagacatgatcccatgtgtttggccttgtttgaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ctccattccccaagtgctaggattgtagacatgatcccatgtgtttggccttgtttgaga 647
Query: 124 tttcttagggactcaaggatgttggtcaggacttgatccatgtctgagcactgatgacat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tttcttagggactcaaggatgttggtcaggacttgatccatgtctgagcactgatgacat 587
Query: 184 caatctgatttttcaaagttgcttaactacccactaggccatctcttactttggattttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 caatctgatttttcaaagttgcttaactacccactaggccatctcttactttggattttt 527
Query: 244 taaaaacctattttgttttgtttgtatgaatgttttgcatgaacagtatatatgtgcact 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 taaaaacctattttgttttgtttgtatgaatgttttgcatgaacagtatatatgtgcact 467
Query: 304 acgtggatgaattctagccacagaatgtatgggttactgattcagtacttgtaactccct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 acgtggatgaattctagccacagaatgtatgggttactgattcagtacttgtaactccct 407
Query: 364 ggaggatattaaacattactccagcttcacaaaagcgggtggcagacagctggtgctgta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ggaggatattaaacattactccagcttcacaaaagcgggtggcagacagctggtgctgta 347
Query: 424 ccttccaagtgctgcagaccatgacgacgacgtcttaacaacatcagcctttacacttac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ccttccaagtgctgcagaccatgacgacgacgtcttaacaacatcagcctttacacttac 287
Query: 484 aagagcctctctatgcattacttttgtaggcatagtctacacatttttgtgttgtatttt 543
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 286 aagagcctctctatgcattacttttgtaggcatagtctacacgtttttgtgttgtatttt 227
Query: 544 tactttcattcaggtttaaatac 566
|| ||||||||||||||||||||
Sbjct: 226 tattttcattcaggtttaaatac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_g23.g1 MSMg01no436_g23.g1 CHROMAT_FILE:
MSMg01no436_g23.g1 PHD_FILE: MSMg01no436_g23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:30 2005
(509 letters)
>mm_chr7_87927756_87928664
Length = 909
Score = 853 bits (441), Expect = 0.0
Identities = 490/511 (95%), Gaps = 13/511 (2%)
Strand = Plus / Plus
Query: 1 aggtcccagcacccacatggcatcttccaactgtctatagtgggttctatgctctcctct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 aggtcccagcacccacatggcatcttccaactgtctatagtgggttctatgctctcttct 260
Query: 61 tgtgcacacgggcacgcagacaaaacatccatatacatgcgtacgatctacagagaatct 120
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 tgtgcacatgggcacgcagacaaaacatccatatacgtgcgtacgatctacagagaatct 320
Query: 121 acagagaatctttaataactgcagaaatgggttagagcacaggaagaagcttccctggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagagaatctttaataactgcagaaatgggttagagcacaggaagaagcttccctggaa 380
Query: 181 tc-gtggatctgtgtttgaaagtctcctacaacgtgggttcccacagtggctccgacttt 239
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 -ctgtggatctgtgtttgaaagtctcctacaacgtgggttcccacagtggctccgacttt 439
Query: 240 gtgcatgtgctcttataaagggtccacctgcacatgcttgcacatccttgcacatgcgtg 299
||||||||||||||| |||||||||| |||||||||||||||||| | || ||
Sbjct: 440 gtgcatgtgctcttagaaagggtccatctgcacatgcttgcacat----g----tg--tg 489
Query: 300 tgaaggccagaggtcaacctcaaacatcatcccttgggtgctgtcctgtccacctcgtga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tgaaggccagaggtcaacctcaaacatcatcccttgggtgctgtcctgtccacctcgtga 549
Query: 360 tttgtttttaatttgcagttattgtacgtatgtgtatcccaggccacactgcacatggga 419
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 550 tttgtttttaatttgcaattattgtacgtatgtgtatcccaggccacaatgcacatggga 609
Query: 420 ggtctggggcagctctctccttccacctttacagtgcttccaagggtcaaatgcaggtca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ggtctggggcagctctctccttccacctttacagtgcttccaagggtcaaatgcaggtca 669
Query: 480 ccagacttaatggttaacaac-atctctgat 509
|||||||||||||||||||| |||||||||
Sbjct: 670 ccagacttaatggttaacaagtatctctgat 700
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
