Query= MSMg01no437_e21.b1 MSMg01no437_e21.b1 CHROMAT_FILE:
MSMg01no437_e21.b1 PHD_FILE: MSMg01no437_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:39 2005
(550 letters)
>mm_chr7_34951288_34952237
Length = 950
Score = 946 bits (489), Expect = 0.0
Identities = 539/571 (94%), Gaps = 24/571 (4%)
Strand = Plus / Plus
Query: 4 ggaattcctggactctctacccagttagcctagtacatctgcagagttccagggtagaaa 63
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ggaattcctggactcactagccagttagcctagtacatctgcagagttccagggtagaaa 239
Query: 64 gagaccctgcctcagtaactgctcgacaatgccccgggagaacgaaccttgaagttgtcc 123
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 240 gagaccctgcctcagtaactgctcgacaatgcccagggagaacgaaccttgaagttgtcc 299
Query: 124 tctggcctccacacacaaaaaacacccatctgtctga----------------------- 160
|||||||||||||||||||||||||||||||||||||
Sbjct: 300 tctggcctccacacacaaaaaacacccatctgtctgataatttctgatttcccgtgccat 359
Query: 161 -tcatttctcattaagcaatatggaacatgttagttactttcattctttctttttttttg 219
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 360 gtcatttctcattaagcaatatggagcatgttagttactttcattctttctttttttttg 419
Query: 220 agatggtttctctgtgtaacagcctcagatctcctggaactctctttgtagaccaggctg 279
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 420 agatggtttctctgtgtaacagcctcagatcccctggaactctctttgtagaccaggctg 479
Query: 280 gcctggaacatacagaatacagaggtcagcctgcctctgcctcctagtgctggaattaaa 339
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 480 gcctggaacatacagaatacagaggtcagtctgcctctgcctcctagtgctggaattaaa 539
Query: 340 gatgtaagccaccacactctcgttaattccttatctacacattcactcaggattacttga 399
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gatgtaagccaccacactcacgttaattccttatctacacattcactcaggattacttga 599
Query: 400 gggctgttgaagaaaatgccctatgtatggtaaaataaataagtaaagtaaaatctagtc 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gggctgttgaagaaaatgccctatgtatggtaaaataaataagtaaagtaaaatctagtc 659
Query: 460 taggagccgtcgtagatggctaaacagttaagagtgctggttgctcttgcataggaccag 519
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 660 taggagccgtcgtagatggctaaacagttaagagtgctggctgctcttgcataggaccag 719
Query: 520 gggttcaattttcaggctcaacatggtgagt 550
|||||||||||||||||||||||||||||||
Sbjct: 720 gggttcaattttcaggctcaacatggtgagt 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_e21.g1 MSMg01no437_e21.g1 CHROMAT_FILE:
MSMg01no437_e21.g1 PHD_FILE: MSMg01no437_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:39 2005
(284 letters)
>mm_chr7_35117703_35118386
Length = 684
Score = 524 bits (271), Expect = e-153
Identities = 280/283 (98%)
Strand = Plus / Minus
Query: 1 atgtcttcgtttataagtgagggccaagttcaagggtcttggttcccaatggggacattc 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgtcttcgtttataagtgagagccaagttcaagggtcttggttcccaatggggacattc 386
Query: 61 ctttagaagagtcaccatggacaagacacagcggccctgggaagaaggagagtgagcctt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 385 ctttagaagagtcaccatggacaagacacagcggccctgggaagaaggagagcgagcctt 326
Query: 121 ggatccacactagtactcaggactcagagaccacgctccttcttccaaggcaaatgctac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggatccacactagtactcaggactcagagaccacgctccttcttccaaggcaaatgctat 266
Query: 181 ttactgtttgacttctgttcttccagaaagcatctctctccaaattgagtaacatgtgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttactgtttgacttctgttcttccagaaagcatctctctccaaattgagtaacatgtgca 206
Query: 241 catgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 catgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 163
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
